RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 GRIA1P42261 906 aa13□□□□□ -0.33
AFF1-201ENST00000307808 PGM5Q15124 567 aa13□□□□□ -0.33
AFF1-201ENST00000307808 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
AFF1-201ENST00000307808 UNC5BQ8IZJ1 945 aa13□□□□□ -0.33
AFF1-201ENST00000307808 COPS4Q9BT78 406 aa13□□□□□ -0.33
AFF1-201ENST00000307808 GTPBP2Q9BX10 602 aaKnown RBP13□□□□□ -0.33
AFF1-201ENST00000307808 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
AFF1-201ENST00000307808 WASF3Q9UPY6 502 aa13□□□□□ -0.33
AFF1-201ENST00000307808 A0A0J9YVX5 310 aa13□□□□□ -0.33
AFF1-201ENST00000307808 IFI30P13284 250 aa13□□□□□ -0.33
AFF1-201ENST00000307808 NATD1Q8N6N6 113 aa13□□□□□ -0.33
AFF1-201ENST00000307808 C8orf48Q96LL4 319 aa13□□□□□ -0.33
AFF1-201ENST00000307808 NUDT4Q9NZJ9 180 aa13□□□□□ -0.33
AFF1-201ENST00000307808 SCP2D1Q9UJQ7 156 aa13□□□□□ -0.33
AFF1-201ENST00000307808 NR2E1Q9Y466 385 aa13□□□□□ -0.33
AFF1-201ENST00000307808 PRORSD1PA6NEY8 169 aa13□□□□□ -0.33
AFF1-201ENST00000307808 SPARCP09486 303 aa13□□□□□ -0.33
AFF1-201ENST00000307808 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
AFF1-201ENST00000307808 CAP2P40123 477 aa13□□□□□ -0.33
AFF1-201ENST00000307808 SLC9A3P48764 834 aa13□□□□□ -0.33
AFF1-201ENST00000307808 USP4Q13107 963 aa13□□□□□ -0.33
AFF1-201ENST00000307808 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
AFF1-201ENST00000307808 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
AFF1-201ENST00000307808 TAPBPLQ9BX59 468 aa13□□□□□ -0.33
AFF1-201ENST00000307808 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 DCDC1P59894 354 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 AIMP2Q13155 320 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 PPM1BO75688 479 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 IL7RP16871 459 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 TIGD2Q4W5G0 525 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ALYREFQ86V81 257 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 PARP8Q8N3A8 854 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 SPATA22Q8NHS9 363 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 NPAS2Q99743 824 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 MPDZO75970 2070 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 MYO16Q9Y6X6 1858 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 KCNK18Q7Z418 384 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 SLC43A3Q8NBI5 491 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 MAB21L2Q9Y586 359 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 STK16O75716 305 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 MATKP42679 507 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CDH13P55290 713 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 HDAC2Q92769 488 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 HSPA12BQ96MM6 686 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CIB1Q99828 191 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ABCG4Q9H172 646 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CCSER2Q9H7U1 834 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 TPTEP56180 551 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 TRAM1Q15629 374 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CLNKQ7Z7G1 428 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 DENND2DQ9H6A0 471 aaPredicted RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 CCR10P46092 362 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CRTC2Q53ET0 693 aaPredicted RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 TMPRSS11EQ9UL52 423 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 TSPAN3O60637 253 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 PCDH1Q08174 1060 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 POC1BQ8TC44 478 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 S100A16Q96FQ6 103 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 RHPN2P1A8MT19 583 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 LACTBL1A8MY62 500 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 ZMPSTE24O75844 475 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 OR6K6Q8NGW6 343 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
AFF1-201ENST00000307808 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
AFF1-201ENST00000307808 H3BM21 787 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 PCDHGA12O60330 932 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 PPM1MQ96MI6 270 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 TREM1Q9NP99 234 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 PDPK1O15530 556 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 RECQL4O94761 1208 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 HNRNPLP14866 589 aaKnown RBP eCLIP12.98□□□□□ -0.339e-6■□□□□ 8.9
AFF1-201ENST00000307808 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
AFF1-201ENST00000307808 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
AFF1-201ENST00000307808 RUVBL1Q9Y265 456 aaKnown RBP12.98□□□□□ -0.33
AFF1-201ENST00000307808 VWA7Q9Y334 891 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
AFF1-201ENST00000307808 RAB39AQ14964 217 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms