RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 EPHB6O15197 1021 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF749O43361 778 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 KCNJ13O60928 360 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 SLC4A1P02730 911 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 HBQ1P09105 142 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 MTHFD1P11586 935 aaKnown RBP11.49□□□□□ -0.57
SMIM4-201ENST00000307106 CDH3P22223 829 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 PREPP48147 710 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 XRCC4Q13426 336 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 GTF2H3Q13889 308 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 TLR1Q15399 786 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 DPYSL2Q16555 572 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 AGAP7PQ5VUJ5 663 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 RPTNQ6XPR3 784 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 POLNQ7Z5Q5 900 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 AMZ2Q86W34 360 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 OR2Y1Q8NGV0 311 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 ARRDC2Q8TBH0 407 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF653Q96CK0 615 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 AGAP4Q96P64 663 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 CSPG4P5Q96PW8 444 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 C1GALT1Q9NS00 363 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 PARVAQ9NVD7 372 aa11.49□□□□□ -0.57
SMIM4-201ENST00000307106 NFKBIL1Q9UBC1 381 aaPredicted RBP11.49□□□□□ -0.57
SMIM4-201ENST00000307106 CFAP20Q9Y6A4 193 aaKnown RBP11.49□□□□□ -0.57
SMIM4-201ENST00000307106 HCFC1P51610 2035 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 CCDC78A2IDD5 438 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 AGPSO00116 658 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 PCDH17O14917 1159 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 MSL3P1P0C860 447 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 CD1EP15812 388 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 POLR2CP19387 275 aaPredicted RBP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF165P49910 485 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 TDGF1P3P51864 188 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 DMPKQ09013 629 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 NIPAL4Q0D2K0 466 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 TMEM115Q12893 351 aaPredicted RBP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 PRKAA1Q13131 559 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 GALNT3Q14435 633 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 PRKD1Q15139 912 aaPredicted RBP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 ASIC2Q16515 512 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 ACAD10Q6JQN1 1059 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 FAM83HQ6ZRV2 1179 aaPredicted RBP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 PTERQ96BW5 349 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 C14orf79Q96F83 325 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 AGPAT1Q99943 283 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 EPS8L2Q9H6S3 715 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 RAD18Q9NS91 495 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 RBM22Q9NW64 420 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMIM4-201ENST00000307106 NDOR1Q9UHB4 597 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 FBN3Q75N90 2809 aa11.48□□□□□ -0.57
SMIM4-201ENST00000307106 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 C19orf84I3L1E1 186 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 MAP3K7O43318 606 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 ALOX12BO75342 701 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 HLA-DQB2P05538 268 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 CD63P08962 238 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 CBSLP0DN79 551 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 CBSP35520 551 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 LMAN1P49257 510 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 FOXL2P58012 376 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 NFE2L1Q14494 772 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 CAMK4Q16566 473 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 C1orf189Q5VU69 101 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 PRAMEF13Q5VWM6 474 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 ZNF324BQ6AW86 544 aaPredicted RBP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TIGD7Q6NT04 549 aaPredicted RBP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 RPUSD3Q6P087 351 aaKnown RBP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 XKRXQ6PP77 449 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TMEM151BQ8IW70 566 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 MLKLQ8NB16 471 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 GDAP1Q8TB36 358 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 MAML1Q92585 1016 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 HSPH1Q92598 858 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 MAGEB10Q96LZ2 347 aaPredicted RBP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 VPS35Q96QK1 796 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 ADGRE3Q9BY15 652 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 SLC6A20Q9NP91 592 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 IFT80Q9P2H3 777 aaPredicted RBP11.47□□□□□ -0.57
SMIM4-201ENST00000307106 AMACRQ9UHK6 382 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TMPRSS11EQ9UL52 423 aa11.47□□□□□ -0.57
SMIM4-201ENST00000307106 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms