RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 TRAF3Q13114 568 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 PTGR1Q14914 329 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 SKA2Q8WVK7 121 aaPredicted RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 NMD3Q96D46 503 aaKnown RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 ASIC4Q96FT7 647 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 SLC46A2Q9BY10 475 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 FAM126AQ9BYI3 521 aaPredicted RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 KLQ9UEF7 1012 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 SLCO3A1Q9UIG8 710 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 LSM1O15116 133 aaKnown RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 MTX2O75431 263 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 EEDO75530 441 aaKnown RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 SRCP12931 536 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 HSD17B1P14061 328 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 CD9P21926 228 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 HLA-FP30511 346 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 ARHGEF7Q14155 803 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 PCBP2Q15366 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
RNF139-201ENST00000303545 SLC30A9Q6PML9 568 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 CYP20A1Q6UW02 462 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 CBR4Q8N4T8 237 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 ACTL8Q9H568 366 aa18.34■□□□□ 0.53
RNF139-201ENST00000303545 CCM2LQ9NUG4 571 aaPredicted RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 KIAA1522Q9P206 1035 aaPredicted RBP18.34■□□□□ 0.53
RNF139-201ENST00000303545 CCDC160A6NGH7 325 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 TFAP2AP05549 437 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 FESP07332 822 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 SPAM1P38567 509 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 CCR2P41597 374 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 RGS4P49798 205 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 RPL26P61254 145 aaKnown RBP18.33■□□□□ 0.53
RNF139-201ENST00000303545 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.53
RNF139-201ENST00000303545 ERMP1Q7Z2K6 904 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 EFL1Q7Z2Z2 1120 aaKnown RBP18.33■□□□□ 0.53
RNF139-201ENST00000303545 CMTR2Q8IYT2 770 aaKnown RBP18.33■□□□□ 0.53
RNF139-201ENST00000303545 OR2AP1Q8NGE2 309 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 CLHC1Q8NHS4 586 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 ZNF597Q96LX8 424 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 LEF1Q9UJU2 399 aaPredicted RBP18.33■□□□□ 0.53
RNF139-201ENST00000303545 TBX21Q9UL17 535 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.53
RNF139-201ENST00000303545 LATS1O95835 1130 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 UGT2B4P06133 528 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 PSMA4P25789 261 aaKnown RBP18.33■□□□□ 0.52
RNF139-201ENST00000303545 SERPINA4P29622 427 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 OR4D2P58180 307 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 ARHGEF6Q15052 776 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 ATP13A5Q4VNC0 1218 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 PDCD4Q53EL6 469 aaKnown RBP18.33■□□□□ 0.52
RNF139-201ENST00000303545 MPPE1Q53F39 396 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 TMEM25Q86YD3 366 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 TMC8Q8IU68 726 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 EPHX4Q8IUS5 362 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 ACDQ96AP0 544 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 ACTR3BQ9P1U1 418 aa18.33■□□□□ 0.52
RNF139-201ENST00000303545 PTBP2Q9UKA9 531 aaKnown RBP18.33■□□□□ 0.52
RNF139-201ENST00000303545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 C8AP07357 584 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 LAG3P18627 525 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 LHCGRP22888 699 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 DGKAP23743 735 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 WDR5P61964 334 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 INPP5AQ14642 412 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 NADK2Q4G0N4 442 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 GPRC6AQ5T6X5 926 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 DNAJC14Q6Y2X3 702 aaPredicted RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 HTR3DQ70Z44 454 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 ADGRG5Q8IZF4 528 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 NXPE1Q8N323 547 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 ZUFSPQ96AP4 578 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 VOPP1Q96AW1 172 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 TCEAL4Q96EI5 215 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 PDLIM5Q96HC4 596 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 TRIM4Q9C037 500 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 RC3H2Q9HBD1 1191 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 OPTCQ9UBM4 332 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 FAM234BA2RU67 622 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 AP1G1O43747 822 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 FGF18O76093 207 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 TNFAIP8O95379 198 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 GNAO1P09471 354 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 HSPA13P48723 471 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 ZFAND4Q86XD8 727 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 CHERPQ8IWX8 916 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 CHST14Q8NCH0 376 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 DUS3LQ96G46 650 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 UHRF1Q96T88 793 aaPredicted RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 TRIM54Q9BYV2 358 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 SLC2A11Q9BYW1 496 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 CAAP1Q9H8G2 361 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 ARMC1Q9NVT9 282 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 OARD1Q9Y530 152 aa18.32■□□□□ 0.52
RNF139-201ENST00000303545 TNPO3Q9Y5L0 923 aaKnown RBP18.32■□□□□ 0.52
RNF139-201ENST00000303545 CROCCQ5TZA2 2017 aa18.31■□□□□ 0.52
RNF139-201ENST00000303545 LOC730098B7Z3J9 87 aa18.31■□□□□ 0.52
RNF139-201ENST00000303545 NEDD8-MDP1E9PL57 170 aa18.31■□□□□ 0.52
RNF139-201ENST00000303545 AHCYL1O43865 530 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms