RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NAF1Q96HR8 494 aaKnown RBP19.09■□□□□ 0.65
HOXC4-201ENST00000303406 TMEM79Q9BSE2 394 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 SPATA16Q9BXB7 569 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 MCOLN1Q9GZU1 580 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 NSUN3Q9H649 340 aaKnown RBP19.09■□□□□ 0.65
HOXC4-201ENST00000303406 WWOXQ9NZC7 414 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 ZIM2Q9NZV7 527 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 TRPS1Q9UHF7 1281 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 CROTQ9UKG9 612 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 PPM1HQ9ULR3 514 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 PTGDR2Q9Y5Y4 395 aa19.09■□□□□ 0.65
HOXC4-201ENST00000303406 MUC22E2RYF6 1773 aaPredicted RBP19.08■□□□□ 0.64
HOXC4-201ENST00000303406 C16orf96A6NNT2 1141 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 CFLARO15519 480 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 MAP3K7O43318 606 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 BCAS2O75934 225 aaPredicted RBP19.08■□□□□ 0.64
HOXC4-201ENST00000303406 SORBS2O94875 1100 aaKnown RBP19.08■□□□□ 0.64
HOXC4-201ENST00000303406 PRNPP04156 253 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 ANXA5P08758 320 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 GGT5P36269 586 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 MMP12P39900 470 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 SESN3P58005 492 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 FOXM1Q08050 763 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 PDGFRLQ15198 375 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 PHKG1Q16816 387 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 MUM1Q2TAK8 710 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 SPATS1Q496A3 300 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 FAM78AQ5JUQ0 283 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 LETMD1Q6P1Q0 360 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 OR52B6Q8NGF0 335 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 ESAMQ96AP7 390 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 ZNF570Q96NI8 536 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 EGFL8Q99944 293 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 HOPXQ9BPY8 73 aaPredicted RBP19.08■□□□□ 0.64
HOXC4-201ENST00000303406 NTMT1Q9BV86 223 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 SLC12A9Q9BXP2 914 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 GDE1Q9NZC3 331 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 OPTCQ9UBM4 332 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 ATG2AQ2TAZ0 1938 aa19.08■□□□□ 0.64
HOXC4-201ENST00000303406 GRXCR1A8MXD5 290 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 H0Y858 1186 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 FTH1P02794 183 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 FSHRP23945 695 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 GTF2A1P52655 376 aaPredicted RBP19.07■□□□□ 0.64
HOXC4-201ENST00000303406 TRAP1Q12931 704 aaKnown RBP19.07■□□□□ 0.64
HOXC4-201ENST00000303406 RPS6KA2Q15349 733 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 ZNF284Q2VY69 593 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 GAB4Q2WGN9 574 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 TCEAL5Q5H9L2 206 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 LDLRAP1Q5SW96 308 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 DHDDSQ86SQ9 333 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 C12orf40Q86WS4 652 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 RASGRP3Q8IV61 690 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 CDYL2Q8N8U2 506 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 TMIEQ8NEW7 156 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 OR4F6Q8NGB9 312 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 OR9I1Q8NGQ6 314 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 METTL6Q8TCB7 284 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 TRIM54Q9BYV2 358 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 VCX3BQ9H321 246 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 IPPKQ9H8X2 491 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 SPAG4Q9NPE6 437 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 HEBP1Q9NRV9 189 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 TMEM181Q9P2C4 612 aa19.07■□□□□ 0.64
HOXC4-201ENST00000303406 EDDM13A0A1B0GTR0 161 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 DYTNA2CJ06 578 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 GRXCR2A6NFK2 248 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 CAPN1P07384 714 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 EBLN1P0CF75 366 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 XRCC1P18887 633 aaPredicted RBP19.06■□□□□ 0.64
HOXC4-201ENST00000303406 AKT1P31749 480 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 VIPR2P41587 438 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 HSPA7P48741 367 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 FLOT2Q14254 428 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 SAMD4BQ5PRF9 694 aaKnown RBP19.06■□□□□ 0.64
HOXC4-201ENST00000303406 TRIM68Q6AZZ1 485 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 BLOC1S3Q6QNY0 202 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 TMC5Q6UXY8 1006 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 LRRC70Q7Z2Q7 622 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 MILR1Q7Z6M3 343 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 GALNT13Q8IUC8 556 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 EFCAB3Q8N7B9 438 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 C12orf76Q8N812 135 aaPredicted RBP19.06■□□□□ 0.64
HOXC4-201ENST00000303406 MYLIPQ8WY64 445 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 ATP6V1E2Q96A05 226 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 ASB9Q96DX5 294 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 GPATCH1Q9BRR8 931 aaKnown RBP19.06■□□□□ 0.64
HOXC4-201ENST00000303406 APOL5Q9BWW9 433 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 SLC29A3Q9BZD2 475 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 PSMD13Q9UNM6 376 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 ANGPTL3Q9Y5C1 460 aa19.06■□□□□ 0.64
HOXC4-201ENST00000303406 PIKFYVEQ9Y2I7 2098 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 ACOT8O14734 319 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 CASQ2O14958 399 aaPredicted RBP19.05■□□□□ 0.64
HOXC4-201ENST00000303406 KATNA1O75449 491 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 HMOX2P30519 316 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 HNMTP50135 292 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 EMX2Q04743 252 aa19.05■□□□□ 0.64
HOXC4-201ENST00000303406 C18orf21Q32NC0 220 aaPredicted RBP19.05■□□□□ 0.64
HOXC4-201ENST00000303406 ATP6AP1LQ52LC2 224 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms