RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 GTF2H2CQ6P1K8 395 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 CDYL2Q8N8U2 506 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 DCBLD1Q8N8Z6 715 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 CFAP61Q8NHU2 1237 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 MAELQ96JY0 434 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 NFKBIL1Q9UBC1 381 aaPredicted RBP14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 TMPRSS11EQ9UL52 423 aa14.26□□□□□ -0.13
SHCBP1-201ENST00000303383 TCF20Q9UGU0 1960 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 SLC22A2O15244 555 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 ATG13O75143 517 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PCDH8O95206 1070 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 LINC00032P0C843 101 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 CYP2A7P20853 494 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 AOAHP28039 575 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 HMOX2P30519 316 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 TIE1P35590 1138 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 INHBCP55103 352 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PHKG1Q16816 387 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 MMEL1Q495T6 779 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PLEKHS1Q5SXH7 462 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 BEND7Q8N7W2 519 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 RP9Q8TA86 221 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 P2RY13Q9BPV8 354 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 COPG1Q9Y678 874 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 ZNF106Q9H2Y7 1883 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 EIF3FO00303 357 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 KATNA1O75449 491 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 UROSP10746 265 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 MAP4P27816 1152 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 NUDT2P50583 147 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 FOXA1P55317 472 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PKNOX1P55347 436 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 TMEM115Q12893 351 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 ART3Q13508 389 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 MAPRE2Q15555 327 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PPP1R3AQ16821 1122 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 C18orf21Q32NC0 220 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 SCUBE1Q8IWY4 988 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 METTL6Q8TCB7 284 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 S1PR5Q9H228 398 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 C1orf21Q9H246 121 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 MMADHCQ9H3L0 296 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 OR4F21O95013 312 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 OTCP00480 354 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 C8GP07360 202 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 SQLEQ14534 574 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 KANK2Q63ZY3 851 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 SYVN1Q86TM6 617 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 PDPRQ8NCN5 879 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 FBXO27Q8NI29 283 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 DTX3LQ8TDB6 740 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 MCOLN3Q8TDD5 553 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 RAB7BQ96AH8 199 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 C1QTNF3Q9BXJ4 246 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 IPPKQ9H8X2 491 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 ZBTB26Q9HCK0 441 aa14.25□□□□□ -0.13
SHCBP1-201ENST00000303383 E2F3O00716 465 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 GALK1P51570 392 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 PCBP2Q15366 365 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 TMEM220Q6QAJ8 160 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 ARMCX6Q7L4S7 300 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 GOLGA7Q7Z5G4 137 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 STMN2Q93045 179 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 NECTIN4Q96NY8 510 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 VPS35Q96QK1 796 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 NUSAP1Q9BXS6 441 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 F5P12259 2224 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 VPS4BO75351 444 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CNTN1Q12860 1018 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 RIPK1Q13546 671 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 FASTKQ14296 549 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 STARD3Q14849 445 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CCDC6Q16204 474 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 AGKQ53H12 422 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CPSF7Q8N684 471 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CDK15Q96Q40 435 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 RIC8BQ9NVN3 520 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 C5orf42Q9H799 3197 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 ATG2BQ96BY7 2078 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 PRDX3P30048 256 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 P2RY2P41231 377 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 C2orf27AQ580R0 203 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CYHR1Q6ZMK1 362 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 DEFB107AQ8IZN7 70 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 COQ10AQ96MF6 247 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 FOPNLQ96NB1 174 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 AKTIPQ9H8T0 292 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 PARVBQ9HBI1 364 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
SHCBP1-201ENST00000303383 ANTXRLA6NF34 631 aa14.23□□□□□ -0.13
SHCBP1-201ENST00000303383 PSMD12O00232 456 aaPredicted RBP14.23□□□□□ -0.13
SHCBP1-201ENST00000303383 AREL1O15033 823 aa14.23□□□□□ -0.13
SHCBP1-201ENST00000303383 TSPAN6O43657 245 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms