RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CD97P48960 835 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 CLCN4P51793 760 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SP3Q02447 781 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 GTF2H2Q13888 395 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ZIK1Q3SY52 487 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 KIAA1841Q6NSI8 718 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 TMEM214Q6NUQ4 689 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 GTF2H2CQ6P1K8 395 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 CYP20A1Q6UW02 462 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PATL1Q86TB9 770 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SERPINA9Q86WD7 417 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ZFAND4Q86XD8 727 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 IPPKQ9H8X2 491 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 DHRS7Q9Y394 339 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 CLOCKO15516 846 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 FFAR2O15552 330 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SMAD6O43541 496 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 RASAL1O95294 804 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PRAMEF1O95521 474 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 CSKP41240 450 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 TUBA4AP68366 448 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 HMGCS1Q01581 520 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SMARCB1Q12824 385 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PTGR1Q14914 329 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 C16orf72Q14CZ0 275 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 GLYATQ6IB77 296 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 SLC8B1Q6J4K2 584 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 EFL1Q7Z2Z2 1120 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ZBTB8BQ8NAP8 495 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 TSPEARQ8WU66 669 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PLD4Q96BZ4 506 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 FEM1AQ9BSK4 669 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ELAC1Q9H777 363 aaKnown RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 VPS51Q9UID3 782 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 ARVCFO00192 962 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 LSM1O15116 133 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 AOC2O75106 756 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 BMP10O95393 424 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 SLC2A4P14672 509 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 MYF6P23409 242 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 ZXDBP98169 803 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 EMX2Q04743 252 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CACNG1Q06432 222 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 PHKG1Q16816 387 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 AARS2Q5JTZ9 985 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 LHX8Q68G74 356 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 MBOAT1Q6ZNC8 495 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CHST9Q7L1S5 443 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 SPRED1Q7Z699 444 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 HID1Q8IV36 788 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 HM13Q8TCT9 377 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 EGFL8Q99944 293 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CLSTN3Q9BQT9 956 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 KLF16Q9BXK1 252 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 TAPBPO15533 448 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 DFNA5O60443 496 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 LDLRP01130 860 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 TFPTP0C1Z6 253 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 COL6A1P12109 1028 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 RPS9P46781 194 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 EEFSECP57772 596 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 RPL38P63173 70 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 GRIK2Q13002 908 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 MILR1Q7Z6M3 343 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 GPR180Q86V85 440 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 APCDD1Q8J025 514 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 PACRGLQ8N7B6 248 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 FAM86B1Q8N7N1 296 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 PDZD8Q8NEN9 1154 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 C2orf15Q8WU43 125 aaKnown RBP12.69□□□□□ -0.38
HIF3A-204ENST00000300862 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 CLPBQ9H078 707 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 ASB8Q9H765 288 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms