RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GALNT5Q7Z7M9 940 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 ERMAPQ96PL5 475 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 DPYSL5Q9BPU6 564 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SNRNP25Q9BV90 132 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 TCF7L1Q9HCS4 588 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 CHST7Q9NS84 486 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 MED11Q9P086 117 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TPST2O60704 377 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TPPPO94811 219 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 APOL3O95236 402 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 MAGEA6P43360 314 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 RPS9P46781 194 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 MON1AQ86VX9 555 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TBC1D21Q8IYX1 336 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 OR10Q1Q8NGQ4 319 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 OR6K6Q8NGW6 343 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 OR4L1Q8NH43 312 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 LIN37Q96GY3 246 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 KIAA1522Q9P206 1035 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 SNX3O60493 162 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 AGXTP21549 392 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 DNAJA1P31689 397 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SCNN1GP51170 649 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 ZFP69Q49AA0 526 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 AKAP14Q86UN6 197 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 MKL1Q969V6 931 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 LGR4Q9BXB1 951 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 FN3KQ9H479 309 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 BRD7Q9NPI1 651 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 FBXO6Q9NRD1 293 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 KCNN3Q9UGI6 736 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 AGO1Q9UL18 857 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 NR2E1Q9Y466 385 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 CPNE6O95741 557 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 IFNA2P01563 188 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 IFNA21P01568 189 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 PAX7P23759 505 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 HTR7P34969 479 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 FAM183BPQ6ZVS7 135 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SLC9B2Q86UD5 537 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 C17orf64Q86WR6 236 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 CYP2W1Q8TAV3 490 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TRAPPC12Q8WVT3 735 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 OR52E6Q96RD3 313 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TBC1D14Q9P2M4 693 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 LRRC10BA6NIK2 292 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 ITGB1P05556 798 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 CRYBB1P53674 252 aaPredicted RBP11.93□□□□□ -0.5
PCF11-201ENST00000298281 SP2Q02086 613 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SLC20A2Q08357 652 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 SPATA19Q7Z5L4 167 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 PIGZQ86VD9 579 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 TOR3AQ9H497 397 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 DNAJC28Q9NX36 388 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 FBXO5Q9UKT4 447 aa11.93□□□□□ -0.5
PCF11-201ENST00000298281 RENP00797 406 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 GNAO1P09471 354 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 CTPS1P17812 591 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 RPL5P46777 297 aaKnown RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 ZNF662Q6ZS27 426 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 BAP1Q92560 729 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 ZBTB45Q96K62 511 aaPredicted RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 TCF12Q99081 682 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 NARSO43776 548 aaKnown RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 ACTL6BO94805 426 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 CXCL14O95715 111 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 CDK18Q07002 472 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 MLC1Q15049 377 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 C1orf94Q6P1W5 598 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 FEM1CQ96JP0 617 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 TGDSO95455 350 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 GABRB2P47870 512 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 ZNF101Q8IZC7 436 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 PNPT1Q8TCS8 783 aaKnown RBP11.92□□□□□ -0.5
PCF11-201ENST00000298281 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 IL17RBQ9NRM6 502 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 SERINC1Q9NRX5 453 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 REV1Q9UBZ9 1251 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 PCDHGC3Q9UN70 934 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 NCANO14594 1321 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 PRAMEF33A0A0G2JMD5 474 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 PLK4O00444 970 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 PRAMEF10O60809 474 aa11.92□□□□□ -0.5
PCF11-201ENST00000298281 ITGA2BP08514 1039 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms