RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 SYNCRIPO60506 623 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 HNRNPCL1O60812 293 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 CDK14O94921 469 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 JUNP05412 331 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 FGF4P08620 206 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 NCF1P14598 390 aaPredicted RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 RGS19P49795 217 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 SMAD4Q13485 552 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 TBCCQ15814 346 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 AGBL4Q5VU57 503 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 FRA10AC1Q70Z53 315 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 PHYKPLQ8IUZ5 450 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 PELI3Q8N2H9 469 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 CXorf40AQ8TE69 158 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 DNASE1L2Q92874 299 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 MAELQ96JY0 434 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 NSUN5Q96P11 429 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 OR52B2Q96RD2 323 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 CCDC28BQ9BUN5 200 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 C8orf33Q9H7E9 229 aaPredicted RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 TMEM165Q9HC07 324 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 DNAAF2Q9NVR5 837 aaKnown RBP15.28■□□□□ 0.04
LSM6-201ENST00000296581 ADAMTS6Q9UKP5 1117 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 TRAF6Q9Y4K3 522 aa15.28■□□□□ 0.04
LSM6-201ENST00000296581 RAD51BO15315 384 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 MBTPS2O43462 519 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 FTH1P02794 183 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 TSPAN8P19075 237 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 NTSR1P30989 418 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 COPAP53621 1224 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 TAS2R38P59533 333 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 CLCQ05315 142 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 LCP2Q13094 533 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 TAF11Q15544 211 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 ZNF648Q5T619 568 aaPredicted RBP15.27■□□□□ 0.04
LSM6-201ENST00000296581 TREML1Q86YW5 311 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 SLC44A3Q8N4M1 653 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 RASGEF1AQ8N9B8 481 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 OR2T3Q8NH03 318 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 NAF1Q96HR8 494 aaKnown RBP15.27■□□□□ 0.04
LSM6-201ENST00000296581 NSL1Q96IY1 281 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 ANKRD27Q96NW4 1050 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 WDR55Q9H6Y2 383 aaPredicted RBP15.27■□□□□ 0.04
LSM6-201ENST00000296581 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 RDH14Q9HBH5 336 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 UTP6Q9NYH9 597 aaKnown RBP15.27■□□□□ 0.04
LSM6-201ENST00000296581 LNPEPQ9UIQ6 1025 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 TSR3Q9UJK0 312 aaKnown RBP15.27■□□□□ 0.04
LSM6-201ENST00000296581 PCTPQ9UKL6 214 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
LSM6-201ENST00000296581 F5P12259 2224 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 FFAR2O15552 330 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 TSPAN6O43657 245 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 EGFP01133 1207 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 MPC1LP0DKB6 136 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 AGTR2P50052 363 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 INHBCP55103 352 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 RPS14P62263 151 aaKnown RBP15.27■□□□□ 0.03
LSM6-201ENST00000296581 SH3BP2P78314 561 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 TMEM115Q12893 351 aaPredicted RBP15.27■□□□□ 0.03
LSM6-201ENST00000296581 PCBP2Q15366 365 aaKnown RBP eCLIP15.27■□□□□ 0.03
LSM6-201ENST00000296581 ZNF776Q68DI1 518 aaPredicted RBP15.27■□□□□ 0.03
LSM6-201ENST00000296581 DLG3Q92796 817 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 KLHL29Q96CT2 875 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 SLC7A6OSQ96CW6 309 aaPredicted RBP15.27■□□□□ 0.03
LSM6-201ENST00000296581 GAS2L1Q99501 681 aaPredicted RBP15.27■□□□□ 0.03
LSM6-201ENST00000296581 SLX1AQ9BQ83 275 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 EPHX3Q9H6B9 360 aa15.27■□□□□ 0.03
LSM6-201ENST00000296581 ATG2BQ96BY7 2078 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 PRLHRP49683 370 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 BTKQ06187 659 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 UBAP2LQ14157 1087 aaKnown RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 PON2Q15165 354 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 PHKG1Q16816 387 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 LSM12Q3MHD2 195 aaKnown RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 KIAA1211LQ6NV74 962 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 NEK10Q6ZWH5 1172 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 ACAD11Q709F0 780 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 CLYBLQ8N0X4 340 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 IL17RCQ8NAC3 791 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 FAM131CQ96AQ9 280 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 LRMDAQ9H2I8 198 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 FBRSQ9HAH7 460 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 ARHGEF3Q9NR81 526 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 HEBP1Q9NRV9 189 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 PTBP2Q9UKA9 531 aaKnown RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 TRIM33Q9UPN9 1127 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 TNPO3Q9Y5L0 923 aaKnown RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 GOLGA8QA0A0J9YX86 632 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 GOLGA8OA6NCC3 632 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 GOLGA8NF8WBI6 632 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 K7ESM1 405 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 E2F3O00716 465 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 PPP6CO00743 305 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 SDHDO14521 159 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 INPP4BO15327 924 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 GPC4O75487 556 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms