RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 HBEGFQ99075 208 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 CEP44Q9C0F1 390 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 C11orf49Q9H6J7 331 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 LATS2Q9NRM7 1088 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 ARMC1Q9NVT9 282 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 KCTD5Q9NXV2 234 aa23.56■■□□□ 1.36
TRIM54-201ENST00000296098 LSM1O15116 133 aaKnown RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 ZNF26P17031 533 aaPredicted RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 LHCGRP22888 699 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 IL12AP29459 219 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 YBX1P67809 324 aaKnown RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 EMX2Q04743 252 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 CARD16Q5EG05 197 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 MTX3Q5HYI7 312 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 ASTLQ6HA08 431 aaPredicted RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 TMEM25Q86YD3 366 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 PROKR1Q8TCW9 393 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 CANT1Q8WVQ1 401 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 RHBDF1Q96CC6 855 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 EMILIN2Q9BXX0 1053 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 CD244Q9BZW8 370 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 RDH14Q9HBH5 336 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 ACTR3BQ9P1U1 418 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 EGFL7Q9UHF1 273 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 NEDD8-MDP1E9PL57 170 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 H0YJX3 145 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 KIAA0355O15063 1070 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 POP4O95707 220 aaKnown RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 CDKL1Q00532 357 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 PRKG2Q13237 762 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 INPP5AQ14642 412 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 ABRAXAS2Q15018 415 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 DPY19L3Q6ZPD9 716 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 DNAJB14Q8TBM8 379 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 ZNF641Q96N77 438 aaPredicted RBP23.55■■□□□ 1.36
TRIM54-201ENST00000296098 COPS8Q99627 209 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 MUC13Q9H3R2 512 aa23.55■■□□□ 1.36
TRIM54-201ENST00000296098 DYTNA2CJ06 578 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ZBBXA8MT70 800 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ARPC2O15144 300 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 UGT2B4P06133 528 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 CBSLP0DN79 551 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 MSH3P20585 1137 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 CBSP35520 551 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 CASP2P42575 452 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 PTSQ03393 145 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ATP13A5Q4VNC0 1218 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 C6orf52Q5T4I8 152 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 HMBOX1Q6NT76 420 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 GOLM1Q8NBJ4 401 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 PPWD1Q96BP3 646 aaKnown RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 PAWRQ96IZ0 340 aaKnown RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 TCF25Q9BQ70 676 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 TRIM8Q9BZR9 551 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 TLR9Q9NR96 1032 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 CCM2LQ9NUG4 571 aaPredicted RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ZMYM5Q9UJ78 669 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 POLR3HQ9Y535 204 aaPredicted RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 PIKFYVEQ9Y2I7 2098 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 TIPRLO75663 272 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 PABPC1P11940 636 aaKnown RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 GSK3BP49841 420 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 RABL3Q5HYI8 236 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ZDHHC20Q5W0Z9 365 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 METTL2BQ6P1Q9 378 aaKnown RBP23.54■■□□□ 1.36
TRIM54-201ENST00000296098 SPPL2CQ8IUH8 684 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ULK4Q96C45 1275 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 TCEAL4Q96EI5 215 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 CNBD2Q96M20 576 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 BEGAINQ9BUH8 593 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 BBS2Q9BXC9 721 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 ALG2Q9H553 416 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 COQ10BQ9H8M1 238 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 UBAP1Q9NZ09 502 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 KLHL42Q9P2K6 505 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 SLC4A7Q9Y6M7 1214 aa23.54■■□□□ 1.36
TRIM54-201ENST00000296098 DHRS12A0PJE2 317 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 GRXCR2A6NFK2 248 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 K7EPI3 171 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 AKAP10O43572 662 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 C1SP09871 688 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 GDF5P43026 501 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 AP5B1Q2VPB7 878 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 HABP4Q5JVS0 413 aaKnown RBP23.53■■□□□ 1.36
TRIM54-201ENST00000296098 CYP20A1Q6UW02 462 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 ERMP1Q7Z2K6 904 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 AMIGO2Q86SJ2 522 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 PPP3R2Q96LZ3 170 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 KCTD14Q9BQ13 255 aaPredicted RBP23.53■■□□□ 1.36
TRIM54-201ENST00000296098 CENPKQ9BS16 269 aa23.53■■□□□ 1.36
TRIM54-201ENST00000296098 NPPAP01160 153 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 G6PDP11413 515 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 PSMA4P25789 261 aaKnown RBP23.52■■□□□ 1.36
TRIM54-201ENST00000296098 DDX6P26196 483 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM54-201ENST00000296098 HTRA4P83105 476 aaPredicted RBP23.52■■□□□ 1.36
TRIM54-201ENST00000296098 B4GALNT1Q00973 533 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 LIPEQ05469 1076 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 TEAD2Q15562 447 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 TBCELQ5QJ74 424 aa23.52■■□□□ 1.36
TRIM54-201ENST00000296098 Q6ZVU0 165 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms