RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ARL1P40616 181 aaPredicted RBP9□□□□□ -0.97
PDPN-201ENST00000294489 GRIA2P42262 883 aa9□□□□□ -0.97
PDPN-201ENST00000294489 PKNOX1P55347 436 aa9□□□□□ -0.97
PDPN-201ENST00000294489 ELAVL3Q14576 367 aaKnown RBP9□□□□□ -0.97
PDPN-201ENST00000294489 ATP13A5Q4VNC0 1218 aa9□□□□□ -0.97
PDPN-201ENST00000294489 TCHHL1Q5QJ38 904 aaPredicted RBP9□□□□□ -0.97
PDPN-201ENST00000294489 SBSNQ6UWP8 590 aa9□□□□□ -0.97
PDPN-201ENST00000294489 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
PDPN-201ENST00000294489 TRAM1L1Q8N609 369 aa9□□□□□ -0.97
PDPN-201ENST00000294489 KCTD5Q9NXV2 234 aa9□□□□□ -0.97
PDPN-201ENST00000294489 EIF2B4Q9UI10 523 aaKnown RBP9□□□□□ -0.97
PDPN-201ENST00000294489 MTCH2Q9Y6C9 303 aa9□□□□□ -0.97
PDPN-201ENST00000294489 PIKFYVEQ9Y2I7 2098 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 AREL1O15033 823 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 LINC00032P0C843 101 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 CBSLP0DN79 551 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 CBSP35520 551 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TNFRSF4P43489 277 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
PDPN-201ENST00000294489 PTK2BQ14289 1009 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 GRM2Q14416 872 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 RPS6KA2Q15349 733 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 PCBP2Q15366 365 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDPN-201ENST00000294489 MUM1Q2TAK8 710 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ITPRIPL2Q3MIP1 535 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TMEM52BQ4KMG9 183 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 FNDC3BQ53EP0 1204 aaKnown RBP8.99□□□□□ -0.97
PDPN-201ENST00000294489 NAIF1Q69YI7 327 aaPredicted RBP8.99□□□□□ -0.97
PDPN-201ENST00000294489 LIPIQ6XZB0 460 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 LRRC74BQ6ZQY2 392 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 MTSS1LQ765P7 747 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ZNF765Q7L2R6 523 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 SYVN1Q86TM6 617 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NLRP8Q86W28 1048 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 RASGRP3Q8IV61 690 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 PDPRQ8NCN5 879 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 LKAAEAR1Q8TD35 194 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 SLC26A7Q8TE54 656 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 OR8D1Q8WZ84 308 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ESAMQ96AP7 390 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ARRDC3Q96B67 414 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ZNF382Q96SR6 550 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NPAS2Q99743 824 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 EGFL8Q99944 293 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 KXD1Q9BQD3 176 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 HDAC8Q9BY41 377 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 FBRSL1Q9HCM7 1045 aaKnown RBP8.99□□□□□ -0.97
PDPN-201ENST00000294489 MRPL40Q9NQ50 206 aaKnown RBP8.99□□□□□ -0.97
PDPN-201ENST00000294489 BTRCQ9Y297 605 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 OARD1Q9Y530 152 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TIMM22Q9Y584 194 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NPC1O15118 1278 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 HGFP14210 728 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ANPEPP15144 967 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 VCLP18206 1134 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ERFP50548 548 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 HTR4Q13639 388 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TAF11Q15544 211 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 LRRC73Q5JTD7 316 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 MIER2Q8N344 545 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 DDHD1Q8NEL9 900 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NAT14Q8WUY8 206 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 ATP6V1E2Q96A05 226 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 DCUN1D1Q96GG9 259 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NECTIN4Q96NY8 510 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 SPATA16Q9BXB7 569 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TUBB1Q9H4B7 451 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 TRPV5Q9NQA5 729 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 RIC8BQ9NVN3 520 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 SUN2Q9UH99 717 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 POLG2Q9UHN1 485 aa8.99□□□□□ -0.97
PDPN-201ENST00000294489 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
PDPN-201ENST00000294489 SGTAO43765 313 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 AP2A2O94973 939 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 KAT7O95251 611 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 BAG2O95816 211 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 GUCA1CO95843 209 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 RPSAP08865 295 aaKnown RBP8.98□□□□□ -0.97
PDPN-201ENST00000294489 IDO1P14902 403 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 GSTA3Q16772 222 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 YAF2Q8IY57 180 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 UCMAQ8WVF2 138 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 FAM131CQ96AQ9 280 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 ZSCAN5AQ9BUG6 496 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 S100A14Q9HCY8 104 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 PRSS16Q9NQE7 514 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 LRRC42Q9Y546 428 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 PTGDR2Q9Y5Y4 395 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
PDPN-201ENST00000294489 A0A1B0GTL3 188 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 NRP2O60462 931 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 SORBS2O94875 1100 aaKnown RBP8.98□□□□□ -0.97
PDPN-201ENST00000294489 OTCP00480 354 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 ALDOCP09972 364 aaKnown RBP8.98□□□□□ -0.97
PDPN-201ENST00000294489 ME2P23368 584 aa8.98□□□□□ -0.97
PDPN-201ENST00000294489 PRDX3P30048 256 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms