RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 THUMPD1Q9NXG2 353 aaKnown RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 A0A0U1RQF3 1178 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 CCDC162PA2VCL2 907 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PEX10O60683 326 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 HLA-DQB2P05538 268 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PRR5P85299 388 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SP2Q02086 613 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PLA2G4EQ3MJ16 856 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SLCO6A1Q86UG4 719 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM192Q8IY95 271 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TULP2O00295 520 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ANGPTL1O95841 491 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 SLC35G1Q2M3R5 365 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ADGRF1Q5T601 910 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 LIN54Q6MZP7 749 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 COX4I2Q96KJ9 171 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 MIPEPQ99797 713 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PIGVQ9NUD9 493 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 ETAA1Q9NY74 926 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 TAS2R1Q9NYW7 299 aa12.62□□□□□ -0.39
PTCD1-201ENST00000292478 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SAGE2PA6NJ88 616 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CBSLP0DN79 551 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CBSP35520 551 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SLC18A2Q05940 514 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 HKDC1Q2TB90 917 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 C6orf52Q5T4I8 152 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM220Q6QAJ8 160 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CHST15Q7LFX5 561 aaPredicted RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 XAGE5Q8WWM1 108 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 KLHL32Q96NJ5 620 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 ATXN10Q9UBB4 475 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 DNAJB9Q9UBS3 223 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 U3KQV3 271 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 OR2AG2A6NM03 316 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 ERVK-21P61565 698 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 IFI44LQ53G44 452 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 BICRALQ6AI39 1079 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 RBM23Q86U06 439 aaKnown RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 GPR135Q8IZ08 494 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 LRTOMTQ8WZ04 291 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CLIP3Q96DZ5 547 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 ZDHHC3Q9NYG2 299 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CCNB2O95067 398 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 LAMP2P13473 410 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SLC7A1P30825 629 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 FOXM1Q08050 763 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM44Q2T9K0 475 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SPATS1Q496A3 300 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 TTLQ8NG68 377 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SCAMP5Q8TAC9 235 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 FAM81AQ8TBF8 368 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 NSMCE3Q96MG7 304 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM209Q96SK2 561 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 GORASP1Q9BQQ3 440 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CCL22O00626 93 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 NRP1O14786 923 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
PTCD1-201ENST00000292478 PCCBP05166 539 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 C8AP07357 584 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 SLC35G6P0C7Q6 338 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 CREB1P16220 341 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 LRRC17Q8N6Y2 441 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 PACRGLQ8N7B6 248 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 OR5K1Q8NHB7 308 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 LRRC3Q9BY71 257 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 IL1RAPQ9NPH3 570 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 ING4Q9UNL4 249 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
PTCD1-201ENST00000292478 INHAP05111 366 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 CCR10P46092 362 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 GALNT2Q10471 571 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF460Q14592 562 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PERM1Q5SV97 790 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 VANGL1Q8TAA9 524 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 RFKQ969G6 155 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 MIR1-1HGQ9H1L0 117 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 COMMD9Q9P000 198 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 SNX7Q9UNH6 387 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 MCIDASD6RGH6 385 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms