RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SYT16Q17RD7 645 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC35G1Q2M3R5 365 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SERPINA9Q86WD7 417 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 GHDCQ8N2G8 530 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 IPCEF1Q8WWN9 437 aaPredicted RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PIWIL1Q96J94 861 aaKnown RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 S100A13Q99584 98 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 CHIAQ9BZP6 476 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 ELL3Q9HB65 397 aaPredicted RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 MAGEE1Q9HCI5 957 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 OR10H1Q9Y4A9 318 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PLK4O00444 970 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 TACR2P21452 398 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 PCDH1Q08174 1060 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 TMPRSS11AQ6ZMR5 421 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 GPC2Q8N158 579 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 NIPA2Q8N8Q9 360 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 LRRC58Q96CX6 371 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SNX27Q96L92 541 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC25A51Q9H1U9 297 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 KAT8Q9H7Z6 458 aaKnown RBP15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 KCTD5Q9NXV2 234 aa15.14■□□□□ 0.01
SHROOM4-201ENST00000289292 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM159BA6NKW6 160 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 CPSF4LA6NMK7 179 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 ZW10O43264 779 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PRKCGP05129 697 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PSKH1P11801 424 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PPP2R2BQ00005 443 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC25A11Q02978 314 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TMBIM1Q969X1 311 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 RELTQ969Z4 430 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 CTPS2Q9NRF8 586 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PIK3C2AO00443 1686 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SCELO95171 688 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PDCD4Q53EL6 469 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 BICRALQ6AI39 1079 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC2A7Q6PXP3 512 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TRNT1Q96Q11 434 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 MAGEB17A8MXT2 336 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 ELFN1P0C7U0 828 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PCLAFQ15004 111 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 ZNHIT3Q15649 155 aaPredicted RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC10A6Q3KNW5 377 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 DCST1Q5T197 706 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 USP43Q70EL4 1123 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM110BQ8TC76 370 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLCO2A1Q92959 643 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TMEM39AQ9NV64 488 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 GIMAP2Q9UG22 337 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PSME2Q9UL46 239 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SPEF1Q9Y4P9 236 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 GSAPA4D1B5 854 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 CCNB2O95067 398 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 STBD1O95210 358 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PPIBP23284 216 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TOMM20Q15388 145 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC22A16Q86VW1 577 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 MOV10Q9HCE1 1003 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 EIF2B3Q9NR50 452 aaKnown RBP15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 IGSF9Q9P2J2 1179 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 UGT2B4P06133 528 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 NPTX1Q15818 432 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TIGD6Q17RP2 521 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 XKR5Q6UX68 686 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 OR5K1Q8NHB7 308 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC13A3Q8WWT9 602 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 TWNKQ96RR1 684 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PTPN18Q99952 460 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 PCDHB1Q9Y5F3 818 aa15.13■□□□□ 0.01
SHROOM4-201ENST00000289292 DCCP43146 1447 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 NOTOA8MTQ0 251 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 MPP2Q14168 576 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SUZ12Q15022 739 aaKnown RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 C9orf64Q5T6V5 341 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 MBLAC2Q68D91 279 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 EPGNQ6UW88 154 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 USP30Q70CQ3 517 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 PARGQ86W56 976 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 PPP1R16AQ96I34 528 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 TMEM74Q96NL1 305 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 COMMD3Q9UBI1 195 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 S100A6P06703 90 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 DGKQP52824 942 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 INTS6LQ5JSJ4 861 aaKnown RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 PRR23CQ6ZRP0 262 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SCAMP5Q8TAC9 235 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 C12orf43Q96C57 262 aaKnown RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 POLE4Q9NR33 117 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 DNAJB9Q9UBS3 223 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 BAIAP2Q9UQB8 552 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 TEX264Q9Y6I9 313 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 FOXD2O60548 495 aaPredicted RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 HERVK_113P63132 956 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 ZBED5Q49AG3 693 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms