RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ATP1B2P14415 290 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PRKAA1Q13131 559 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CTBP1Q13363 440 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 USP39Q53GS9 565 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 GPRC6AQ5T6X5 926 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 HECTD2Q5U5R9 776 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 RAET1GQ6H3X3 334 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 LAYNQ6UX15 382 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 APOPT1Q96IL0 206 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CNOT10Q9H9A5 744 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 WDR41Q9HAD4 459 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 VCX3AQ9NNX9 186 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 IL1RAPL1Q9NZN1 696 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 LNPEPQ9UIQ6 1025 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TMPRSS11EQ9UL52 423 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TRIM49D1C9J1S8 452 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PSMD12O00232 456 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 IFRD1O00458 451 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 RFPL1O75677 317 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 FTH1P02794 183 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PKMP14618 531 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 ALOX15P16050 662 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 VCLP18206 1134 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 MSH3P20585 1137 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PRLHRP49683 370 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 WSCD2Q2TBF2 565 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 SEL1L3Q68CR1 1132 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 ANO7Q6IWH7 933 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 NEK10Q6ZWH5 1172 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CLEC14AQ86T13 490 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 FOXJ1Q92949 421 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CCDC138Q96M89 665 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 DUSP15Q9H1R2 295 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 DCDC2Q9UHG0 476 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 N6AMT1Q9Y5N5 214 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CCL22O00626 93 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 FPGTO14772 594 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TM9SF1O15321 606 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 VPS26AO75436 327 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 IGHV4-34P06331 123 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 STMN1P16949 149 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PPP2CBP62714 309 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PPP2CAP67775 309 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CDK3Q00526 305 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 FGL2Q14314 439 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 GBX1Q14549 363 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CNSTQ6PJW8 725 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 ARMCX6Q7L4S7 300 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 DTWD2Q8NBA8 298 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TMEM145Q8NBT3 493 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PDLIM5Q96HC4 596 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 ELMO2Q96JJ3 720 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 SHCBP1LQ9BZQ2 653 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 WDR26Q9H7D7 661 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 PHPT1Q9NRX4 125 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 SPATA6Q9NWH7 488 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 SELENONQ9NZV5 590 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC17A6Q9P2U8 582 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CTNNAL1Q9UBT7 734 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 CD84Q9UIB8 345 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 MBD1Q9UIS9 605 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 MID2Q9UJV3 735 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TMCO1Q9UM00 188 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 MTO1Q9Y2Z2 717 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 COQ6Q9Y2Z9 468 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 TPP1O14773 563 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 NUDT14O95848 222 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 KELP23276 732 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CRHR1P34998 444 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 RABIFP47224 123 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 PLOD1Q02809 727 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF658BQ4V348 819 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ZC3H12BQ5HYM0 836 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF549Q6P9A3 640 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 OXR1Q8N573 874 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 BCAS4Q8TDM0 211 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SNX15Q9NRS6 342 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 TAS2R13Q9NYV9 303 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC17A4Q9Y2C5 497 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 VWA7Q9Y334 891 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 PRKAB1Q9Y478 270 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 DTNAQ9Y4J8 743 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 A6NNZ2 444 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 GOLGA8TH3BQL2 631 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CHUKO15111 745 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 GLRA3O75311 464 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ALDOAP04075 364 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 DCNP07585 359 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 IGFALSP35858 605 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 B4GALNT1Q00973 533 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 TAF11Q15544 211 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 PLEKHS1Q5SXH7 462 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ABI3BPQ7Z7G0 1075 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ADGRG6Q86SQ4 1221 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms