RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FRS2Q8WU20 508 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ZNF641Q96N77 438 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 FAM83DQ9H4H8 585 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 AK5Q9Y6K8 562 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 PRRT4C9JH25 899 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ZNF197O14709 1029 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ANGPT2O15123 496 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SLC22A2O15244 555 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 FKBP6O75344 327 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 PEX2P28328 305 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ST8SIA6P61647 398 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 UFM1P61960 85 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 GRAMD1BQ3KR37 738 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 TLDC1Q6P9B6 456 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 TRIM74Q86UV6 250 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 PHYKPLQ8IUZ5 450 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ABHD8Q96I13 439 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 PIF1Q9H611 641 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 KLQ9UEF7 1012 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 PRPF19Q9UMS4 504 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 OR7A17O14581 309 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 KLK8O60259 260 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 HNRNPA1P09651 372 aaKnown RBP eCLIP17.63■□□□□ 0.41
CAPN1-201ENST00000279247 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.411e-12■□□□□ 9.8
CAPN1-201ENST00000279247 ACOX1Q15067 660 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 FNDC3BQ53EP0 1204 aaKnown RBP17.63■□□□□ 0.41
CAPN1-201ENST00000279247 FAM78AQ5JUQ0 283 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 DHDDSQ86SQ9 333 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 MCCC1Q96RQ3 725 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-201ENST00000279247 LYSMD1Q96S90 227 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 CEP44Q9C0F1 390 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 PKD2L2Q9NZM6 624 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 OPTCQ9UBM4 332 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 IL36AQ9UHA7 158 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 TIMP2P16035 220 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 HMGCS1Q01581 520 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 LRP8Q14114 963 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 MAP7D1Q3KQU3 841 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 TTLL9Q3SXZ7 439 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 CELF5Q8N6W0 485 aaKnown RBP17.63■□□□□ 0.41
CAPN1-201ENST00000279247 CROTQ9UKG9 612 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 LRRC42Q9Y546 428 aa17.63■□□□□ 0.41
CAPN1-201ENST00000279247 SCN8AQ9UQD0 1980 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 PFKLP17858 780 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 RPIAP49247 311 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 ABRAXAS2Q15018 415 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 CPSF6Q16630 551 aaKnown RBP eCLIP17.62■□□□□ 0.41
CAPN1-201ENST00000279247 MACC1Q6ZN28 852 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 EP400NLQ6ZTU2 488 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 CBARPQ8N350 705 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-201ENST00000279247 LILRA3Q8N6C8 439 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-201ENST00000279247 ELMO1Q92556 727 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 ULK4Q96C45 1275 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 ATG10Q9H0Y0 220 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 COPS7BQ9H9Q2 264 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-201ENST00000279247 PRORSD1PA6NEY8 169 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 TMEM202A6NGA9 273 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 C16orf96A6NNT2 1141 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 OR56A5P0C7T3 313 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 TIGD2Q4W5G0 525 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 UBE2R2Q712K3 238 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-201ENST00000279247 ZFP14Q9HCL3 533 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 RNF11Q9Y3C5 154 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 DNAH14Q0VDD8 3507 aa17.62■□□□□ 0.41
CAPN1-201ENST00000279247 CLGNO14967 610 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 GGT5P36269 586 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ATP6AP1LQ52LC2 224 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ISLR2Q6UXK2 745 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 DNAJB14Q8TBM8 379 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 FGF13Q92913 245 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 TMEM79Q9BSE2 394 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 KCTD5Q9NXV2 234 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 TRIOBPQ9H2D6 2365 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 UPK3BL1B0FP48 263 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 UPK3BL2E5RIL1 263 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ELFN1P0C7U0 828 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 UBE3AQ05086 875 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 LYPLAL1Q5VWZ2 237 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 BRAT1Q6PJG6 821 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 Q6ZSR9 355 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 UCMAQ8WVF2 138 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ZNF382Q96SR6 550 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 EGFL7Q9UHF1 273 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 OARD1Q9Y530 152 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 NUP214P35658 2090 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-201ENST00000279247 FADS2P1A8MWK0 482 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ATP1B2P14415 290 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ATP6V1C1P21283 382 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 CD9P21926 228 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ITPKAP23677 461 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 VIPR1P32241 457 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 WASP42768 502 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 ABRQ12979 859 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 PPP2R2DQ66LE6 453 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 PARS2Q7L3T8 475 aaKnown RBP17.61■□□□□ 0.41
CAPN1-201ENST00000279247 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 SFRP1Q8N474 314 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms