RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 YDJCA8MPS7 323 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ERAL1O75616 437 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CDH1P12830 882 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 GSTM3P21266 225 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 USF2Q15853 346 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CNDP2Q96KP4 475 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHGB2Q9Y5G2 931 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF318Q5VUA4 2279 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 KANTRA0A1W2PQU2 76 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZBTB11O95625 1053 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 RB1P06400 928 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SLC7A1P30825 629 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SLC18A1P54219 525 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 AP1S1P61966 158 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 DRICH1Q6PGQ1 229 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZFPM1Q8IX07 1006 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 KAZALD1Q96I82 304 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CIB1Q99828 191 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 FBXO9Q9UK97 447 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 GRIN2DO15399 1336 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 H0Y858 1186 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 AGR2O95994 175 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PBX1P40424 430 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 IFI44LQ53G44 452 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CATSPERGQ6ZRH7 1159 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 LIX1Q8N485 282 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ERVK-5Q9HDB9 667 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 BCL9O00512 1426 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 A0A0G2JPF8 293 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 HNRNPCL3B7ZW38 293 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 E9PAM4 449 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 M0QX08 132 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 HNRNPCL4P0DMR1 293 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PEX2P28328 305 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ATXN1P54253 815 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TBC1D25Q3MII6 688 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF572Q7Z3I7 529 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 KLHL36Q8N4N3 616 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 OR10H4Q8NGA5 316 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 IKZF2Q9UKS7 526 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PLCL2Q9UPR0 1127 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MAP4K5Q9Y4K4 846 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 EFCAB9A8MZ26 197 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GNB5O14775 395 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PRAMEF12O95522 483 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PRNPP04156 253 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PKMP14618 531 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GNAZP19086 355 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CMPK1P30085 196 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ADAM17P78536 824 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SCRN3Q0VDG4 424 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 LDLRAP1Q5SW96 308 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 APOBEC3HQ6NTF7 200 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TMPRSS11BQ86T26 416 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ERI1Q8IV48 349 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 OR4C6Q8NH72 309 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 THRSPQ92748 146 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 COPS7AQ9UBW8 275 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 RAI2Q9Y5P3 530 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SMIM35A0A1B0GVV1 85 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 OR2AT4A6NND4 320 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MAGEB17A8MXT2 336 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CLDN4O14493 209 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TACSTD2P09758 323 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 NR2C1P13056 603 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 AQP4P55087 323 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF234Q14588 700 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 PTPN20Q4JDL3 420 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 C9orf131Q5VYM1 1079 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MCEMP1Q8IX19 187 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SPATA6LQ8N4H0 392 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 DNAJB9Q9UBS3 223 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MRPS23Q9Y3D9 190 aaKnown RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SLIT2O94813 1529 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 A8MX80 341 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 GABRDO14764 452 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 MEIS2O14770 477 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 FESP07332 822 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CTPS1P17812 591 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 STOMP27105 288 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CDH12P55289 794 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 OR2B6P58173 313 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TAF1AQ15573 450 aaPredicted RBP7.87□□□□□ -1.15
LIMD1-201ENST00000273317 SMU1Q2TAY7 513 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 C9orf64Q5T6V5 341 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CMC1Q7Z7K0 106 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 TMEM17Q86X19 198 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 KIAA0319LQ8IZA0 1049 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF615Q8N8J6 731 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 LRRC57Q8N9N7 239 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 NEDD4LQ96PU5 975 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 HSD17B14Q9BPX1 270 aa7.87□□□□□ -1.15
LIMD1-201ENST00000273317 CARD8Q9Y2G2 431 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms