RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 GDF5P43026 501 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 RPL38P63173 70 aaKnown RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 LAIR2Q6ISS4 152 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 TDRD15B5MCY1 1934 aaKnown RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 TYW5A2RUC4 315 aaKnown RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 STX16O14662 325 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 XPNPEP2O43895 674 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 HS6ST1O60243 411 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 SLC2A4P14672 509 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 IL2P60568 153 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 HMGCS1Q01581 520 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 CRY1Q16526 586 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 PARP15Q460N3 678 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 CRTC3Q6UUV7 619 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 TMCO5AQ8N6Q1 288 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 OR2T12Q8NG77 320 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 SDCCAG3Q96C92 435 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 AURKBQ96GD4 344 aaPredicted RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 TUBA1CQ9BQE3 449 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 C8orf4Q9NR00 106 aa16.65■□□□□ 0.26
RTN1-201ENST00000267484 PAK1IP1Q9NWT1 392 aaPredicted RBP16.65■□□□□ 0.26
RTN1-201ENST00000267484 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 BCAS1O75363 584 aaPredicted RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 PRKD3O94806 890 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 PRLP01236 227 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 HOXB8P17481 243 aaPredicted RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 HOXD9P28356 352 aaPredicted RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 RPS24P62847 133 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 C6orf141Q5SZD1 244 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 AFTPHQ6ULP2 937 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 KRTCAP2Q8N6L1 136 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 TERB1Q8NA31 727 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 ABHD11Q8NFV4 315 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 RAD21L1Q9H4I0 556 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 PDFQ9HBH1 243 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 COMMD8Q9NX08 183 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 TMEM9Q9P0T7 183 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 NUP214P35658 2090 aaPredicted RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 HTTP42858 3142 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 LSM1O15116 133 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 SERPINB7O75635 380 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 PARNO95453 639 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 B3GALT4O96024 378 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 ZNF12P17014 697 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 OR1G1P47890 313 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 RAD23AP54725 363 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 FAM174BQ3ZCQ3 159 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 C10orf111Q8N326 155 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 NKAPQ8N5F7 415 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 CNIH3Q8TBE1 160 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 NEURL2Q9BR09 285 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 YTHDF1Q9BYJ9 559 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 HPS4Q9NQG7 708 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 SLC6A13Q9NSD5 602 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 FBXO10Q9UK96 956 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 ARVCFO00192 962 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 SULT1C4O75897 302 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 SLC6A4P31645 630 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 GRIK2Q13002 908 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 GOLGA7Q7Z5G4 137 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 RAB2BQ8WUD1 216 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 TDRD1Q9BXT4 1180 aaKnown RBP16.64■□□□□ 0.25
RTN1-201ENST00000267484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTN1-201ENST00000267484 PDE10AQ9Y233 779 aa16.64■□□□□ 0.25
RTN1-201ENST00000267484 OR7A17O14581 309 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 ANKRD28O15084 1053 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 KLK8O60259 260 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 HSPA7P48741 367 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 IL1RL1Q01638 556 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 TRIP4Q15650 581 aaPredicted RBP16.63■□□□□ 0.25
RTN1-201ENST00000267484 FXNQ16595 210 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 RGS21Q2M5E4 152 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 MILR1Q7Z6M3 343 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 GALNT5Q7Z7M9 940 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 DPP10Q8N608 796 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 PNPT1Q8TCS8 783 aaKnown RBP16.63■□□□□ 0.25
RTN1-201ENST00000267484 NCLNQ969V3 563 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 CINPQ9BW66 212 aaPredicted RBP16.63■□□□□ 0.25
RTN1-201ENST00000267484 CRISPLD1Q9H336 500 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 NSUN3Q9H649 340 aaKnown RBP16.63■□□□□ 0.25
RTN1-201ENST00000267484 SMPD4Q9NXE4 827 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 BAG5Q9UL15 447 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 SLC30A1Q9Y6M5 507 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 DRGXA6NNA5 263 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 MITFO75030 526 aaPredicted RBP16.63■□□□□ 0.25
RTN1-201ENST00000267484 GMNNO75496 209 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 TACR2P21452 398 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 SPATS1Q496A3 300 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 SLC16A12Q6ZSM3 486 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 FRA10AC1Q70Z53 315 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 CHPT1Q8WUD6 406 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 FATE1Q969F0 183 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 FKBP10Q96AY3 582 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 NRBF2Q96F24 287 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 SLC47A1Q96FL8 570 aa16.63■□□□□ 0.25
RTN1-201ENST00000267484 SEPT5Q99719 369 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms