RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RPL10P27635 214 aaKnown RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 SLC2A7Q6PXP3 512 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 LINGO4Q6UY18 593 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 SPPL2BQ8TCT7 592 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 STON2Q8WXE9 905 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 NKIRAS2Q9NYR9 191 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 MALT1Q9UDY8 824 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TESMINQ9Y4I5 508 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 RAI2Q9Y5P3 530 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TBX18O95935 607 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 PABPC1P11940 636 aaKnown RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 MYCLP1P12525 358 aaPredicted RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 C4BPBP20851 252 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 PPP2R1BP30154 601 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 OR1D2P34982 312 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 HCAR3P49019 387 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 AKR1D1P51857 326 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 NKX2-5P52952 324 aaPredicted RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 IST1P53990 364 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 CDKL1Q00532 357 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 GALNT2Q10471 571 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TMEM236Q5W0B7 351 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TMPRSS11AQ6ZMR5 421 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 CPNE9Q8IYJ1 553 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 LRRC17Q8N6Y2 441 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 OR8H1Q8NGG4 311 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 SMOXQ9NWM0 555 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 VPS51Q9UID3 782 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 PTBP2Q9UKA9 531 aaKnown RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 NOTOA8MTQ0 251 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 SLC28A1O00337 649 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 KPNA5O15131 536 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 XPNPEP2O43895 674 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 DIRAS1O95057 198 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 STBD1O95210 358 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 EPORP19235 508 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 OLR1P78380 273 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 PTSQ03393 145 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TCAIMQ8N3R3 496 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TXNDC5Q8NBS9 432 aaKnown RBP11.4□□□□□ -0.58
VPS33A-201ENST00000267199 OR13C4Q8NGS5 318 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 HAPLN3Q96S86 360 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 SLC29A1Q99808 456 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
VPS33A-201ENST00000267199 PRR23AA6NEV1 266 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 OR6C75A6NL08 312 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 SSNA1O43805 119 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 PORP16435 677 aaPredicted RBP11.4□□□□□ -0.59
VPS33A-201ENST00000267199 EDNRBP24530 442 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 NUDT6P53370 316 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 PURAQ00577 322 aaKnown RBP11.4□□□□□ -0.59
VPS33A-201ENST00000267199 MYBPC1Q00872 1141 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 CYP2A13Q16696 494 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 ALFQ53S48 1182 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 NAPRTQ6XQN6 538 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 TRMT11Q7Z4G4 463 aaKnown RBP11.4□□□□□ -0.59
VPS33A-201ENST00000267199 TP53INP2Q8IXH6 220 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 CYP4Z2PQ8N1L4 340 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 PHC3Q8NDX5 983 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 GTF2A1LQ9UNN4 478 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 CLCA2Q9UQC9 943 aa11.4□□□□□ -0.59
VPS33A-201ENST00000267199 TRIM64CA6NLI5 447 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SOCS2O14508 198 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SLC22A1O15245 554 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 DHRS4L1P0CG22 281 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 UROSP10746 265 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 HPCAL1P37235 193 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 KIR3DL1P43629 444 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF423Q2M1K9 1284 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 FBXL19Q6PCT2 694 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF773Q6PK81 442 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SLC13A3Q8WWT9 602 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 BIRC7Q96CA5 298 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CNPPD1Q9BV87 410 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ZDHHC6Q9H6R6 413 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 FAIMQ9NVQ4 179 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 LRP5O75197 1615 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 DDX60Q8IY21 1712 aaKnown RBP11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SDHDO14521 159 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CASKO14936 926 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SNNO75324 88 aaPredicted RBP11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CLDN11O75508 207 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 C1RP00736 705 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 KCNE1P15382 129 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 IMPDH1P20839 514 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 FLT3LGP49771 235 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 UFM1P61960 85 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 PFKPQ01813 784 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ARHGAP15Q53QZ3 475 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 RBFAQ8N0V3 343 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms