RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NDST3O95803 873 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 PRLP01236 227 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 TACR2P21452 398 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 OPRL1P41146 370 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 CASP9P55211 416 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 IL10RBQ08334 325 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 DNASE1L3Q13609 305 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 DCDC5Q6ZRR9 648 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 PRR23BQ6ZRT6 265 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 OR2T12Q8NG77 320 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 PNPT1Q8TCS8 783 aaKnown RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 LKAAEAR1Q8TD35 194 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 WBP2Q969T9 261 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 DERL2Q9GZP9 239 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 SACM1LQ9NTJ5 587 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 TMEM247A6NEH6 219 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 K7ERQ8 282 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 PRAMEF11O60813 436 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 NBNO60934 754 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 VPS26AO75436 327 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 PRSS23O95084 383 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 HTR1AP08908 422 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 DCKP27707 260 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 GTF2H3Q13889 308 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 DAG1Q14118 895 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 SMN1Q16637 294 aaKnown RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 SULT1C3Q6IMI6 304 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 KLHL23Q8NBE8 558 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 HPS4Q9NQG7 708 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 RAI2Q9Y5P3 530 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 MYO1GB0I1T2 1018 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 ALPLP05186 524 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 HLA-DPA1P20036 260 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 HOXD9P28356 352 aaPredicted RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 CTGFP29279 349 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 IDUAP35475 653 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 HLCSP50747 726 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 CD47Q08722 323 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 SF1Q15637 639 aaKnown RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 CPSF6Q16630 551 aaKnown RBP eCLIP16.54■□□□□ 0.24
SQLE-201ENST00000265896 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 MORN1Q5T089 497 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 TMEM236Q5W0B7 351 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 USP50Q70EL3 339 aaPredicted RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 GOLGA7Q7Z5G4 137 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 SKA2Q8WVK7 121 aaPredicted RBP16.54■□□□□ 0.24
SQLE-201ENST00000265896 ZNF583Q96ND8 569 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 FUNDC2Q9BWH2 189 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 ALOXE3Q9BYJ1 711 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 SCUBE2Q9NQ36 999 aa16.54■□□□□ 0.24
SQLE-201ENST00000265896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
SQLE-201ENST00000265896 FUOMA2VDF0 154 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 CYP11A1P05108 521 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 ASGR1P07306 291 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 HTR1BP28222 390 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 ZNF140P52738 457 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 IL5RAQ01344 420 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 EMX2Q04743 252 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 VAC14Q08AM6 782 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 SPRYD7Q5W111 196 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 CRTC3Q6UUV7 619 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 RNF19BQ6ZMZ0 732 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 RTN4RL1Q86UN2 441 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 SPARTQ8N0X7 666 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 TEX26Q8N6G2 289 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 RHEBL1Q8TAI7 183 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 OSCP1Q8WVF1 389 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 C1orf74Q96LT6 269 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 FEM1AQ9BSK4 669 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 PAK1IP1Q9NWT1 392 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 SCML2Q9UQR0 700 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 FCF1Q9Y324 198 aaKnown RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 C2orf81A6NN90 581 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 A8MU76 341 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 F5H5T6 163 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 GMNNO75496 209 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 ANXA6P08133 673 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 PHKG1Q16816 387 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 TXNDC11Q6PKC3 985 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 PRSS55Q6UWB4 352 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 ZFAND4Q86XD8 727 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 PACRGLQ8N7B6 248 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 PYCR2Q96C36 320 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 INIPQ9NRY2 104 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 RASSF1Q9NS23 344 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 OR7A17O14581 309 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 INSIG1O15503 277 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 DEAF1O75398 565 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 ZNF682O95780 498 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 EPHA2P29317 976 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 ZNF829Q3KNS6 432 aaPredicted RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 FAM98BQ52LJ0 330 aaKnown RBP16.53■□□□□ 0.24
SQLE-201ENST00000265896 XKR7Q5GH72 579 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 CLLU1OSQ5K130 101 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 IGFN1Q86VF2 1251 aa16.53■□□□□ 0.24
SQLE-201ENST00000265896 RASAL3Q86YV0 1011 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms