RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 FERMT1Q9BQL6 677 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 EFHD1Q9BUP0 239 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 ULBP3Q9BZM4 244 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 SLC25A18Q9H1K4 315 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 ASB8Q9H765 288 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 ARNT2Q9HBZ2 717 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 PSMD13Q9UNM6 376 aa9.52□□□□□ -0.89
VPS41-201ENST00000265745 TLN1Q9Y490 2541 aaKnown RBP9.52□□□□□ -0.89
VPS41-201ENST00000265745 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 KLHL33A6NCF5 533 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 SUV39H1O43463 412 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 SGTAO43765 313 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 STK10O94804 968 aaKnown RBP9.51□□□□□ -0.89
VPS41-201ENST00000265745 FGF5P12034 268 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 ZNF28P17035 718 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 NELFEP18615 380 aaKnown RBP9.51□□□□□ -0.89
VPS41-201ENST00000265745 F8A1P23610 371 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 AKT1P31749 480 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 CETN2P41208 172 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 STAT5AP42229 794 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 VAV2P52735 878 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 SPARCL1Q14515 664 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 IRGCQ6NXR0 463 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 FAM92BQ6ZTR7 304 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 DET1Q7L5Y6 550 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 KLHDC8BQ8IXV7 354 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 ESX1Q8N693 406 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
VPS41-201ENST00000265745 ACRBPQ8NEB7 543 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 GPR150Q8NGU9 434 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 OR2L2Q8NH16 312 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 NAT14Q8WUY8 206 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 LINC00615Q96LM1 132 aaPredicted RBP9.51□□□□□ -0.89
VPS41-201ENST00000265745 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
VPS41-201ENST00000265745 C19orf43Q9BQ61 176 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 ADNPQ9H2P0 1102 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 ACSL5Q9ULC5 683 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
VPS41-201ENST00000265745 IGHV5-51A0A0C4DH38 117 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 LDB2O43679 373 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 SPAG6O75602 509 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 ZNF189O75820 626 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 CRTAMO95727 393 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PRKAR1AP10644 381 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 MTHFD1P11586 935 aaKnown RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 FOLR1P15328 257 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PBLDP30039 288 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 CCR10P46092 362 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 ZNF140P52738 457 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 POLE2P56282 527 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PPP1CAP62136 330 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 NFKB2Q00653 900 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PDE1BQ01064 536 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PARP6Q2NL67 630 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS41-201ENST00000265745 BCL7AQ4VC05 210 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 KCTD11Q693B1 232 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 C6orf15Q6UXA7 325 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PEX26Q7Z412 305 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 GAS2L3Q86XJ1 694 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 FAM71DQ8N9W8 422 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 OR13C4Q8NGS5 318 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 STARD8Q92502 1023 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 UBXN4Q92575 508 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 ELMO2Q96JJ3 720 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 MAP3K3Q99759 626 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 BAG1Q99933 345 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 TBL1YQ9BQ87 522 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 WWP1Q9H0M0 922 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 IMP3Q9NV31 184 aaKnown RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 FEZ2Q9UHY8 353 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 TUBD1Q9UJT1 453 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 AMFRQ9UKV5 643 aa9.5□□□□□ -0.89
VPS41-201ENST00000265745 HEMK1Q9Y5R4 338 aaPredicted RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 CFAP20Q9Y6A4 193 aaKnown RBP9.5□□□□□ -0.89
VPS41-201ENST00000265745 OR5K3A6NET4 321 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 PYCARD-AS1I3L0S3 204 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 DDX3YO15523 660 aaKnown RBP9.49□□□□□ -0.89
VPS41-201ENST00000265745 KIAA0754O94854 1291 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 WISP1O95388 367 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 METTL18O95568 372 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 POLBP06746 335 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 RALBP11234 206 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 ATP1B2P14415 290 aaPredicted RBP9.49□□□□□ -0.89
VPS41-201ENST00000265745 TCN2P20062 427 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 ITGALP20701 1170 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 OAS2P29728 719 aaKnown RBP9.49□□□□□ -0.89
VPS41-201ENST00000265745 HADHAP40939 763 aa9.49□□□□□ -0.89
VPS41-201ENST00000265745 TMPRSS15P98073 1019 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms