RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 HOXA9P31269 272 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 SLC7A2P52569 658 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 DMC1Q14565 340 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 KIAA0907Q7Z7F0 614 aaPredicted RBP16.59■□□□□ 0.25
CHKA-201ENST00000265689 PCYOX1LQ8NBM8 494 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 FRS2Q8WU20 508 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 TMEM79Q9BSE2 394 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 KLHL4Q9C0H6 718 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 SLC52A3Q9NQ40 469 aa16.59■□□□□ 0.25
CHKA-201ENST00000265689 SUCOQ9UBS9 1254 aaKnown RBP16.59■□□□□ 0.25
CHKA-201ENST00000265689 BBIP1A8MTZ0 92 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 WASH3PC4AMC7 463 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 DNAJA2O60884 412 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 LEFTY1O75610 366 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 VCLP18206 1134 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 CCR7P32248 378 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 UFM1P61960 85 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 ARSIQ5FYB1 569 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 BLOC1S3Q6QNY0 202 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 RTL10Q7L3V2 364 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 AHI1Q8N157 1196 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 SCAMP4Q969E2 229 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 ZNF707Q96C28 371 aaPredicted RBP16.58■□□□□ 0.25
CHKA-201ENST00000265689 HEPHQ9BQS7 1158 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 BATF3Q9NR55 127 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 KCTD5Q9NXV2 234 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 NDUFAF1Q9Y375 327 aa16.58■□□□□ 0.25
CHKA-201ENST00000265689 PLXNB3Q9ULL4 1909 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 C5orf67F2Z3F1 127 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.24
CHKA-201ENST00000265689 ANGPT2O15123 496 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 HNRNPA1P09651 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHKA-201ENST00000265689 YBX1P67809 324 aaKnown RBP16.58■□□□□ 0.24
CHKA-201ENST00000265689 TRAF3Q13114 568 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 POM121L1PQ3SYA9 428 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 C6orf136Q5SQH8 315 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 PDSS2Q86YH6 399 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 SFRP1Q8N474 314 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 ZNF366Q8N895 744 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 ROPN1LQ96C74 230 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 RHBDF1Q96CC6 855 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 WWOXQ9NZC7 414 aa16.58■□□□□ 0.24
CHKA-201ENST00000265689 ATG2BQ96BY7 2078 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 LINC01565O15544 149 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 MTX2O75431 263 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ZFP36L2P47974 494 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 POLR2LP62875 67 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 KLC1Q07866 573 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ARHGEF7Q14155 803 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 CAPRIN1Q14444 709 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 TTLL9Q3SXZ7 439 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 TCEAL5Q5H9L2 206 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 IRGCQ6NXR0 463 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 HSD11B1LQ7Z5J1 315 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 MILR1Q7Z6M3 343 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 FNDC5Q8NAU1 212 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 LEMD2Q8NC56 503 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 VPS33AQ96AX1 596 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ERLEC1Q96DZ1 483 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 SPATA16Q9BXB7 569 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 RIC8BQ9NVN3 520 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 MRPS23Q9Y3D9 190 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 SPEGQ15772 3267 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 IGLV3-16A0A075B6K0 115 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 SYNCRIPO60506 623 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 OTCP00480 354 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 CTSLP07711 333 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 AQP4P55087 323 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ERVK-8P63133 956 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 UBE3AQ05086 875 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 DHCR24Q15392 516 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 PPP2R2DQ66LE6 453 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ZFP1Q6P2D0 407 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 LILRA2Q8N149 483 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 SPDL1Q96EA4 605 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 ZFYVE19Q96K21 471 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 GPATCH1Q9BRR8 931 aaKnown RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 CD244Q9BZW8 370 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 SLC24A3Q9HC58 644 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 PFDN4Q9NQP4 134 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 MARK1Q9P0L2 795 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 C6orf203Q9P0P8 240 aaPredicted RBP16.57■□□□□ 0.24
CHKA-201ENST00000265689 ANGPTL3Q9Y5C1 460 aa16.57■□□□□ 0.24
CHKA-201ENST00000265689 VIPR2P41587 438 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 PIK3CGP48736 1102 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 ABRAXAS2Q15018 415 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 ATP6AP1LQ52LC2 224 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 SAMD4BQ5PRF9 694 aaKnown RBP16.56■□□□□ 0.24
CHKA-201ENST00000265689 C6orf10Q5SRN2 563 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 SULT1C3Q6IMI6 304 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 BRAT1Q6PJG6 821 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 ULK4Q96C45 1275 aa16.56■□□□□ 0.24
CHKA-201ENST00000265689 TRIM8Q9BZR9 551 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms