RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PHTF2Q8N3S3 785 aa11.92□□□□□ -0.5
SMG6-201ENST00000263073 HDAC2Q92769 488 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
SMG6-201ENST00000263073 ELFN1P0C7U0 828 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 SLC18A2Q05940 514 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ACAP2Q15057 778 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PDPRQ8NCN5 879 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 NKD2Q969F2 451 aaPredicted RBP11.91□□□□□ -0.5
SMG6-201ENST00000263073 GRIP1Q9Y3R0 1128 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 SAGE2PA6NJ88 616 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PLK4O00444 970 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 CCNB2O95067 398 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 AKR1A1P14550 325 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ZNF12P17014 697 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PRKACGP22612 351 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 LMO2P25791 158 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 CDH5P33151 784 aaPredicted RBP11.91□□□□□ -0.5
SMG6-201ENST00000263073 ACTR3P61158 418 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 NPTX1Q15818 432 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ZBTB8BQ8NAP8 495 aaPredicted RBP11.91□□□□□ -0.5
SMG6-201ENST00000263073 SIX2Q9NPC8 291 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 FBXW2Q9UKT8 454 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 RIPK3Q9Y572 518 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TRAV19A0A0A6YYK7 116 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 SPATA31C2B4DYI2 1134 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 IRF6O14896 467 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PRKCGP05129 697 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 RPIAP49247 311 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 OAZ1P54368 228 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 LCP2Q13094 533 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 GFOD2Q3B7J2 385 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 HSDL1Q3SXM5 330 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ZZZ3Q8IYH5 903 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ATAD1Q8NBU5 361 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 LEMD2Q8NC56 503 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 NKX2-3Q8TAU0 364 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 DCAKDQ8WVC6 231 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 IL4I1Q96RQ9 567 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 YIPF4Q9BSR8 244 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 WRAP53Q9BUR4 548 aaKnown RBP11.91□□□□□ -0.5
SMG6-201ENST00000263073 RIMKLBQ9ULI2 386 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 STXBP5LQ9Y2K9 1186 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 A0A0X1KG70 313 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 GPIP06744 558 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TMEM236Q5W0B7 351 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 OR7D4Q8NG98 312 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TMEM39AQ9NV64 488 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 HMGXB4Q9UGU5 601 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 MLXQ9UH92 298 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PEX16Q9Y5Y5 336 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 A0A0G2JN53 185 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 NOTOA8MTQ0 251 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PRAMEF1O95521 474 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 IFNW1P05000 195 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 WASP42768 502 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ALDH3A2P51648 485 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TAS2R39P59534 338 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 TAF10Q12962 218 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 C1orf127Q8N9H9 656 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 PHC3Q8NDX5 983 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ADAMTS15Q8TE58 950 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 RNF31Q96EP0 1072 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 BEX2Q9BXY8 128 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 BEX1Q9HBH7 125 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 DNAJC11Q9NVH1 559 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 THG1LQ9NWX6 298 aaKnown RBP11.91□□□□□ -0.5
SMG6-201ENST00000263073 ZDHHC2Q9UIJ5 367 aa11.91□□□□□ -0.5
SMG6-201ENST00000263073 ROBO3Q96MS0 1386 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 FGBP02675 491 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 DNTTP04053 509 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 SLC35G4P0C7Q5 338 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 KIAA1161Q6NSJ0 714 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 USP43Q70EL4 1123 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RBM23Q86U06 439 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 CLP1Q92989 425 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 TRMOQ9BU70 441 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 AASDHPPTQ9NRN7 309 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 FKBPLQ9UIM3 349 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 FAM86C2PA6NEL3 165 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 NME6O75414 186 aaPredicted RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 STK16O75716 305 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RASGRP1O95267 797 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PRDX6P30041 224 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RPL9P32969 192 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 VBP1P61758 197 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PIGFQ07326 219 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RGS1Q08116 209 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 TARDBPQ13148 414 aaKnown RBP eCLIP11.9□□□□□ -0.58e-9■■■■■ 30
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms