RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 TSSK3Q96PN8 268 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 B3GNT4Q9C0J1 378 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 ARVCFO00192 962 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PAPSS1O43252 624 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 TRUB2O95900 331 aaKnown RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 MASP1P48740 699 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 POLR2JP52435 117 aaKnown RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 SLC5A3P53794 718 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PITPNAQ00169 270 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 USP30Q70CQ3 517 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 C12orf29Q8N999 325 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 OR10H4Q8NGA5 316 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 OR2L2Q8NH16 312 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PMEPA1Q969W9 287 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 TBX5Q99593 518 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 SLC17A7Q9P2U7 560 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 ASF1AQ9Y294 204 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 FFAR2O15552 330 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 TBX1O43435 398 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-202ENST00000262676 GCNT6Q5T4J0 391 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 ADNP2Q6IQ32 1131 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 LNX2Q8N448 690 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PHC3Q8NDX5 983 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 METTL21AQ8WXB1 218 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 RAB26Q9ULW5 256 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 PEX16Q9Y5Y5 336 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 UBIAD1Q9Y5Z9 338 aa12.71□□□□□ -0.37
TTC39A-202ENST00000262676 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 EPHB6O15197 1021 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 WFS1O76024 890 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 CLPXO76031 633 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 TUBA4AP68366 448 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 DCST1Q5T197 706 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 FUT10Q6P4F1 479 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 ASB18Q6ZVZ8 466 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 CUZD1Q86UP6 607 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 HMGB4Q8WW32 186 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 BADQ92934 168 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 KXD1Q9BQD3 176 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 NR2E1Q9Y466 385 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 MAFKO60675 156 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 HSD3B1P14060 373 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 MC4RP32245 332 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.38
TTC39A-202ENST00000262676 KLHL26Q53HC5 615 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 REP15Q6BDI9 236 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 GALNT7Q86SF2 657 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 RDH11Q8TC12 318 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 KLK6Q92876 244 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 MTMR9Q96QG7 549 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.38
TTC39A-202ENST00000262676 HOPXQ9BPY8 73 aaPredicted RBP12.71□□□□□ -0.38
TTC39A-202ENST00000262676 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.38
TTC39A-202ENST00000262676 RIOK2Q9BVS4 552 aaKnown RBP12.71□□□□□ -0.38
TTC39A-202ENST00000262676 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.38
TTC39A-202ENST00000262676 FXYD6-FXYD2A0A087WZ82 144 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
TTC39A-202ENST00000262676 REM1O75628 298 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 PAPSS2O95340 614 aaPredicted RBP12.7□□□□□ -0.38
TTC39A-202ENST00000262676 C8AP07357 584 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 ITGB5P18084 799 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 NT5EP21589 574 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 SSR2P43308 183 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 C1QTNF8P60827 252 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 LPIN3Q9BQK8 851 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 FXYD6Q9H0Q3 95 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 ATP13A3Q9H7F0 1226 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 TCF7L1Q9HCS4 588 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 CDH22Q9UJ99 828 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 VNN2O95498 520 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 ELP6Q0PNE2 266 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 TMPRSS11BQ86T26 416 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 AMIGO3Q86WK7 504 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 SUN3Q8TAQ9 357 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 KCNU1A8MYU2 1149 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 I3L521 148 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 PPIBP23284 216 aaKnown RBP12.7□□□□□ -0.38
TTC39A-202ENST00000262676 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
TTC39A-202ENST00000262676 CHAF1BQ13112 559 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 TUSC3Q13454 348 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 RHEBQ15382 184 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 CCNYL2Q5T2Q4 361 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 SPATA19Q7Z5L4 167 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 OR51V1Q9H2C8 321 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 CACNG4Q9UBN1 327 aa12.7□□□□□ -0.38
TTC39A-202ENST00000262676 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms