RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CHMP1AQ9HD42 196 aaPredicted RBP4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ODF2LQ9ULJ1 636 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF711Q9Y462 761 aa4.25□□□□□ -1.73
CCDC54-201ENST00000261058 PLSCR5A0PG75 271 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 H0YIN7 160 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 SSX4O60224 188 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 PDE9AO76083 593 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 ZWINTO95229 277 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 LDLRP01130 860 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 PSMA3P25788 255 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 PPP5CP53041 499 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
CCDC54-201ENST00000261058 CDK3Q00526 305 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 ROR1Q01973 937 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 GAGE5Q13069 117 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 GAGE6Q13070 117 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 ALCAMQ13740 583 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 KRT33BQ14525 404 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 TMEM266Q2M3C6 531 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 ARMC3Q5W041 872 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 CCDC191Q8NCU4 936 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 CFAP61Q8NHU2 1237 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 OR6C1Q96RD1 312 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 SLX1AQ9BQ83 275 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 SEMA6AQ9H2E6 1030 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 HHATLQ9HCP6 504 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 IL17BQ9UHF5 180 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 NME7Q9Y5B8 376 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 PCDHGB1Q9Y5G3 927 aa4.24□□□□□ -1.73
CCDC54-201ENST00000261058 A0A0G2JNG1 304 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TEX13DA0A0J9YY54 714 aaPredicted RBP4.23□□□□□ -1.73
CCDC54-201ENST00000261058 C15orf62A8K5M9 175 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 A8MXE2 369 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 OR10H2O60403 315 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 PSMD10O75832 226 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 BCL10O95999 233 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 DANCRP0C864 163 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 MMP15P51511 669 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 CCR3P51677 355 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF132P52740 706 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 CD81P60033 236 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 KIR2DS5Q14953 304 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 GCNT6Q5T4J0 391 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 STXBP5Q5T5C0 1151 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 GRTP1Q5TC63 336 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ALS2CLQ60I27 953 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TMEM211Q6ICI0 200 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 CAPRIN2Q6IMN6 1127 aaKnown RBP4.23□□□□□ -1.73
CCDC54-201ENST00000261058 FAM171BQ6P995 826 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 LINGO4Q6UY18 593 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 RBPMS2Q6ZRY4 209 aaKnown RBP4.23□□□□□ -1.73
CCDC54-201ENST00000261058 FOXL2NBQ6ZUU3 175 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 DSG4Q86SJ6 1040 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF595Q8IYB9 648 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 AFAP1Q8N556 730 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 RFLNBQ8N5W9 214 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 OTUD6BQ8N6M0 293 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TC2NQ8N9U0 490 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TSPAN14Q8NG11 270 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 PTERQ96BW5 349 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ABHD8Q96I13 439 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF830Q96NB3 372 aaPredicted RBP4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF582Q96NG8 517 aaPredicted RBP4.23□□□□□ -1.73
CCDC54-201ENST00000261058 LRRC1Q9BTT6 524 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 CCDC106Q9BWC9 280 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 ANKZF1Q9H8Y5 726 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 OLAHQ9NV23 265 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TAB2Q9NYJ8 693 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 C5AR2Q9P296 337 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 RHCGQ9UBD6 479 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 SCN5AQ14524 2016 aa4.23□□□□□ -1.73
CCDC54-201ENST00000261058 TRBC2A0A5B9 178 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 TMEM221A6NGB7 291 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 GPR137BO60478 399 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 DKC1O60832 514 aaKnown RBP eCLIP4.22□□□□□ -1.73
CCDC54-201ENST00000261058 TBX10O75333 385 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 MED24O75448 989 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 CSF2RAP15509 400 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 MLLT10P55197 1068 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 CDH13P55290 713 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 IRX3P78415 501 aaPredicted RBP4.22□□□□□ -1.73
CCDC54-201ENST00000261058 IZUMO4Q1ZYL8 232 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF628Q5EBL2 1059 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 TCP11X2Q5H9J9 407 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 WBP2NLQ6ICG8 309 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 FIGLAQ6QHK4 219 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 FAM198BQ6UWH4 519 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 ZNF771Q7L3S4 317 aaPredicted RBP4.22□□□□□ -1.73
CCDC54-201ENST00000261058 LMNTD2Q8IXW0 634 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 FBXO39Q8N4B4 442 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 MOSPD2Q8NHP6 518 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 SECTM1Q8WVN6 248 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 PRMT6Q96LA8 375 aaPredicted RBP4.22□□□□□ -1.73
CCDC54-201ENST00000261058 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 OLFM1Q99784 485 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 EQTNQ9NQ60 294 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 HAO2Q9NYQ3 351 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 NPAP1Q9NZP6 1156 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms