RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 VCLP18206 1134 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 KRT4P19013 534 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 TYK2P29597 1187 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 PBLDP30039 288 aaPredicted RBP20.33■□□□□ 0.85
RTCA-201ENST00000260563 MAGEA12P43365 314 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 CTBSQ01459 385 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 CTSL3PQ5NE16 218 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 CMC1Q7Z7K0 106 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 C11orf96Q7Z7L8 435 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 GKN2Q86XP6 184 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 GATAD2AQ86YP4 633 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 C4orf33Q8N1A6 199 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 SAP25Q8TEE9 199 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 SMC6Q96SB8 1091 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 TSSK1BQ9BXA7 367 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 UCKL1Q9NWZ5 548 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 DOLKQ9UPQ8 538 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 DNMT3AQ9Y6K1 912 aaPredicted RBP20.33■□□□□ 0.85
RTCA-201ENST00000260563 NEMP2A6NFY4 417 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 GOLGA8RI6L899 631 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 PCDHGA12O60330 932 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 FTH1P02794 183 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 PYGBP11216 843 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 STMN1P16949 149 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 SLC12A2P55011 1212 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 SUZ12Q15022 739 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 SH2D5Q6ZV89 423 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 TAF8Q7Z7C8 310 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 SDR16C5Q8N3Y7 309 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 CCL4L1Q8NHW4 92 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 GPBAR1Q8TDU6 330 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 ACMSDQ8TDX5 336 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 TSPAN17Q96FV3 270 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 LINC00615Q96LM1 132 aaPredicted RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 OLFM1Q99784 485 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 KLC4Q9NSK0 619 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 KCNK6Q9Y257 313 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 PLEKHM1Q9Y4G2 1056 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 CSNK1G3Q9Y6M4 447 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 RIF1Q5UIP0 2472 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 ASCC3Q8N3C0 2202 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 GDF9O60383 454 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 CREB1P16220 341 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 FDXRP22570 491 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 AK4P27144 223 aaPredicted RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 OAS2P29728 719 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 ACTR1BP42025 376 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 CSRP3P50461 194 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 TAS2R39P59534 338 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 RAB10P61026 200 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 ACTR1AP61163 376 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 ZKSCAN8Q15776 578 aaPredicted RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 UAP1L1Q3KQV9 507 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 PTRHD1Q6GMV3 140 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 SLC30A9Q6PML9 568 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 RAPH1Q70E73 1250 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
RTCA-201ENST00000260563 AMZ2Q86W34 360 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 CEP97Q8IW35 865 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 OSGEPL1Q9H4B0 414 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 DNAJC16Q9Y2G8 782 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 PCDHGB2Q9Y5G2 931 aa20.32■□□□□ 0.84
RTCA-201ENST00000260563 ZNF292O60281 2723 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 KLHL33A6NCF5 533 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 C4orf47A7E2U8 309 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 FFAR2O15552 330 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 POP7O75817 140 aaKnown RBP20.31■□□□□ 0.84
RTCA-201ENST00000260563 MPOP05164 745 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 ANXA6P08133 673 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 BRAFP15056 766 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 HPDP32754 393 aaPredicted RBP20.31■□□□□ 0.84
RTCA-201ENST00000260563 CCNFP41002 786 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 CDKN2DP55273 166 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 SLC18A2Q05940 514 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 SLC14A1Q13336 389 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 INAVAQ3KP66 663 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 KANSL1Q7Z3B3 1105 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 KIAA2013Q8IYS2 634 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 SLC25A45Q8N413 288 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 ALKBH8Q96BT7 664 aaKnown RBP20.31■□□□□ 0.84
RTCA-201ENST00000260563 FAM122AQ96E09 287 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 CABS1Q96KC9 395 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 PANX3Q96QZ0 392 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 CCM2Q9BSQ5 444 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 PCMTD2Q9NV79 361 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 SLC23A2Q9UGH3 650 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 ST14Q9Y5Y6 855 aa20.31■□□□□ 0.84
RTCA-201ENST00000260563 COL5A1P20908 1838 aaPredicted RBP20.3■□□□□ 0.84
RTCA-201ENST00000260563 A0A096LPK6 155 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 LMO7DNF2Z398 122 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 H3BMM5 538 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 PHGDHO43175 533 aaKnown RBP20.3■□□□□ 0.84
RTCA-201ENST00000260563 KCNJ13O60928 360 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 GSTM1P09488 218 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 ALPPL2P10696 532 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 CRABP2P29373 138 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 GSTM4Q03013 218 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 DEFB133Q30KQ1 61 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 NRROSQ86YC3 692 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 OR2L2Q8NH16 312 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms