RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RPE65Q16518 533 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 MAP9Q49MG5 647 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 ZNF658BQ4V348 819 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 C3orf38Q5JPI3 329 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 PACS1Q6VY07 963 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TMEM26Q6ZUK4 368 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 SYDE1Q6ZW31 735 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 RAB11FIP2Q7L804 512 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 JAMLQ86YT9 394 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 SLITRK4Q8IW52 837 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 SPATA4Q8NEY3 305 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 OR10G6Q8NH81 332 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 HM13Q8TCT9 377 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 NCSTNQ92542 709 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 NXPE2Q96DL1 559 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 C16orf45Q96MC5 204 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 C12orf66Q96MD2 445 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 RUNDC3BQ96NL0 473 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TMEM74Q96NL1 305 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 FCRL3Q96P31 734 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 XAB2Q9HCS7 855 aaKnown RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 POT1Q9NUX5 634 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 IMP3Q9NV31 184 aaKnown RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TMEM9Q9P0T7 183 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 SAMD15Q9P1V8 674 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 MARCH4Q9P2E8 410 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 ZMIZ1Q9ULJ6 1067 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 SATB2Q9UPW6 733 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 CFAP20Q9Y6A4 193 aaKnown RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 FRYQ5TBA9 3013 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 CCDC187A0A096LP49 1063 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 IGHV5-10-1A0A0J9YXX1 117 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ZCWPW2A0A1B0GU75 182 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 FAM237BA0A1B0GVD1 139 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PMS2P1A4D2B8 440 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TMEM8BA6NDV4 472 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TMX2-CTNND1H3BSU7 103 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 QSOX1O00391 747 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 DUX1O43812 170 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 BRINP1O60477 761 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 FTH1P02794 183 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 SLC35G4P0C7Q5 338 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 MTHFD1P11586 935 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 HGFP14210 728 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TYRP1P17643 537 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PAMP19021 973 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ARNTP27540 789 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PDHA2P29803 388 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 CCKBRP32239 447 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 CSF2RBP32927 897 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 MAGEA3P43357 314 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ARCN1P48444 511 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 LSSP48449 732 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TTPAP49638 278 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 EPHA4P54764 986 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 GABREP78334 506 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 MRPS25P82663 173 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 C2orf54Q08AI8 447 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 BRD3Q15059 726 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 CLPPQ16740 277 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ANKRD20A4Q4UJ75 823 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 AARS2Q5JTZ9 985 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PHF19Q5T6S3 580 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ARMC3Q5W041 872 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 KIAA0930Q6ICG6 404 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TMEM71Q6P5X7 295 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 NAPRTQ6XQN6 538 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TMEM135Q86UB9 458 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 HOOK3Q86VS8 718 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PROSER1Q86XN7 944 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 RCBTB1Q8NDN9 531 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 OR4D9Q8NGE8 314 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 GPR150Q8NGU9 434 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 WDR36Q8NI36 951 aaKnown RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 JPH3Q8WXH2 748 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ELMO1Q92556 727 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 ZNF669Q96BR6 464 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 LIN37Q96GY3 246 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PRR11Q96HE9 360 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-201ENST00000257262 PWWP2AQ96N64 755 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 TRIM31Q9BZY9 425 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 STRADBQ9C0K7 418 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 P2RY12Q9H244 342 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 COG4Q9H9E3 785 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 VPS37BQ9H9H4 285 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 POLR1BQ9H9Y6 1135 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 UCK1Q9HA47 277 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 IL1RAPL1Q9NZN1 696 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 OGFRQ9NZT2 677 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 DKK4Q9UBT3 224 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 MAD1L1Q9Y6D9 718 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms