RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 S1PR4O95977 384 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 UMPSP11172 480 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 MYCLP1P12525 358 aaPredicted RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 CD6P30203 668 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 EIF2DP41214 584 aaKnown RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 CLCN5P51795 746 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 MVKQ03426 396 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 SEMA3AQ14563 771 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 KANK2Q63ZY3 851 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 RFPL4BQ6ZWI9 263 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 BEND5Q7L4P6 421 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 OR8H2Q8N162 312 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 CEP295NLQ96MC4 621 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 PIN4Q9Y237 131 aaKnown RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 TANC1Q9C0D5 1861 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 SMIM28A0A1B0GU29 152 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 HOXC11O43248 304 aaPredicted RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 CHRNB1P11230 501 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 SERPINH1P50454 418 aaKnown RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 NUDT6P53370 316 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 CRY1Q16526 586 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 PRSS36Q5K4E3 855 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 KIAA0930Q6ICG6 404 aaPredicted RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 LYPD8Q6UX82 237 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 METTL4Q8N3J2 472 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 SCAMP5Q8TAC9 235 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 MTFMTQ96DP5 389 aaKnown RBP14.16□□□□□ -0.14
SDC1-201ENST00000254351 Q96MT0 163 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 DEPDC7Q96QD5 511 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 PRM3Q9NNZ6 103 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 TRPV5Q9NQA5 729 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 ZNF225Q9UK10 706 aa14.16□□□□□ -0.14
SDC1-201ENST00000254351 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 GLTPD2A6NH11 291 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 GAS2O43903 313 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 MAFKO60675 156 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ZFP36L2P47974 494 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 GEMP55040 296 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PRKG2Q13237 762 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ARMCX2Q7L311 632 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PTRH1Q86Y79 214 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 EID3Q8N140 333 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 HASPINQ8TF76 798 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 VMP1Q96GC9 406 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 VAT1Q99536 393 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 TRMOQ9BU70 441 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RERGLQ9H628 205 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 CNGB3Q9NQW8 809 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 MRGBPQ9NV56 204 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PAQR5Q9NXK6 330 aaPredicted RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 VNN3Q9NY84 501 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 C3orf18Q9UK00 162 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 SERPINA1P01009 418 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ITIH1P19827 911 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 IGFBP5P24593 272 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 DCTP40126 519 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ATP4BP51164 291 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 DAOAP59103 153 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 EMX2Q04743 252 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 LCP2Q13094 533 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 SEMA3BQ13214 749 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 TAB1Q15750 504 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 C6orf136Q5SQH8 315 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 GDPD3Q7L5L3 318 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PROSER1Q86XN7 944 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 LRRC49Q8IUZ0 686 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 CRYBG2Q8N1P7 616 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ELMOD1Q8N336 334 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ATP6V0D2Q8N8Y2 350 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 NT5C3BQ969T7 300 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 TMEM246Q9BRR3 403 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 AIG1Q9NVV5 245 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 MAGEL2Q9UJ55 1249 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 TESMINQ9Y4I5 508 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 GOLGA8CPA6NN73 597 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 MEN1O00255 615 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RGS5O15539 181 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ECI2O75521 394 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 EEDO75530 441 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 C1QCP02747 245 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 IFI30P13284 250 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 LIPAP38571 399 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PGFP49763 221 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 OAZ1P54368 228 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 EEFSECP57772 596 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 PPP2R2BQ00005 443 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 IHHQ14623 411 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ANKS6Q68DC2 871 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 CES5AQ6NT32 575 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 FKBP9P1Q75LS8 142 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms