RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SEC14L3Q9UDX4 400 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 PITPNM1O00562 1244 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 PDCD5O14737 125 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 FGF10O15520 208 aaPredicted RBP13□□□□□ -0.33
PCDHGA3-201ENST00000253812 PCDHGA12O60330 932 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 CSF2P04141 144 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 CDH5P33151 784 aaPredicted RBP13□□□□□ -0.33
PCDHGA3-201ENST00000253812 STT3AP46977 705 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
PCDHGA3-201ENST00000253812 EEFSECP57772 596 aaKnown RBP13□□□□□ -0.33
PCDHGA3-201ENST00000253812 SEMA5AQ13591 1074 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 ZPBP2Q6X784 338 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 OR52J3Q8NH60 311 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 C1orf216Q8TAB5 229 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLC38A4Q969I6 547 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 SERPINB11Q96P15 392 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 LRRC3Q9BY71 257 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 TRPV4Q9HBA0 871 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 ATP13A1Q9HD20 1204 aa13□□□□□ -0.33
PCDHGA3-201ENST00000253812 CHRM5P08912 532 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 ICAM3P32942 547 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 MAN2A2P49641 1150 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 NOMO1Q15155 1222 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 BMT2Q1RMZ1 405 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 MYLK3Q32MK0 819 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 IRF2BP1Q8IU81 584 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLC9A9Q8IVB4 645 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 UBQLNLQ8IYU4 475 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CHST4Q8NCG5 386 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 TCTEX1D2Q8WW35 142 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 LENG9Q96B70 501 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 LRTM1Q9HBL6 345 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 RNF6Q9Y252 685 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 H3BRB1 525 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 MEIS2O14770 477 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 HCN1O60741 890 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CXCL8P10145 99 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 DNASE1P24855 282 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CDH12P55289 794 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 MBTD1Q05BQ5 628 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 VGLL4Q14135 290 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 FAM117BQ6P1L5 589 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 ZNF730Q6ZMV8 503 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 MMAAQ8IVH4 418 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 OR10A6Q8NH74 314 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 TCF25Q9BQ70 676 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CCDC3Q9BQI4 270 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLA2Q9H6Q3 261 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 IKZF2Q9UKS7 526 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 NPHS1O60500 1241 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PTGIRP43119 386 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PAOXQ6QHF9 649 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 DET1Q7L5Y6 550 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 ERMP1Q7Z2K6 904 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 FDXACB1Q9BRP7 624 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PCDHGB6Q9Y5F9 930 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 C1orf196B1AJZ1 125 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 GATBO75879 557 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 TGFB3P10600 412 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CLK3P49761 638 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 FCGRTP55899 365 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 LHFPL3Q86UP9 236 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 ASB15Q8WXK1 588 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 EXOC2Q96KP1 924 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 SEMA3GQ9NS98 782 aa12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 PPIEQ9UNP9 301 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-201ENST00000253812 C17orf102A2RUQ5 167 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 E9PAM4 449 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 EPCAMP16422 314 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 TBX4P57082 545 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 TEAD4Q15561 434 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 HLA-DQA1Q5Y7H0 255 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 SHQ1Q6PI26 577 aaKnown RBP12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 PAMR1Q6UXH9 720 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 OR4A15Q8NGL6 344 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 COL21A1Q96P44 957 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 WACQ9BTA9 647 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 SMURF2Q9HAU4 748 aa12.98□□□□□ -0.33
PCDHGA3-201ENST00000253812 SEC14L4Q9UDX3 406 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms