RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 AAK1Q2M2I8 961 aa21.31■■□□□ 1
CLN6-201ENST00000249806 SLC5A9Q2M3M2 681 aa21.31■■□□□ 1
CLN6-201ENST00000249806 TIGD2Q4W5G0 525 aa21.31■■□□□ 1
CLN6-201ENST00000249806 PDCD4Q53EL6 469 aaKnown RBP21.31■■□□□ 1
CLN6-201ENST00000249806 RABL3Q5HYI8 236 aa21.31■■□□□ 1
CLN6-201ENST00000249806 COQ5Q5HYK3 327 aa21.31■■□□□ 1
CLN6-201ENST00000249806 AMIGO2Q86SJ2 522 aa21.31■■□□□ 1
CLN6-201ENST00000249806 RHBDF1Q96CC6 855 aa21.31■■□□□ 1
CLN6-201ENST00000249806 EMILIN2Q9BXX0 1053 aa21.31■■□□□ 1
CLN6-201ENST00000249806 CPEB1Q9BZB8 566 aaKnown RBP21.31■■□□□ 1
CLN6-201ENST00000249806 WWOXQ9NZC7 414 aa21.31■■□□□ 1
CLN6-201ENST00000249806 PCDHA9Q9Y5H5 950 aa21.31■■□□□ 1
CLN6-201ENST00000249806 MTCL1Q9Y4B5 1905 aaKnown RBP21.3■■□□□ 1
CLN6-201ENST00000249806 PABPC1P11940 636 aaKnown RBP21.3■■□□□ 1
CLN6-201ENST00000249806 MRPL19P49406 292 aaKnown RBP21.3■■□□□ 1
CLN6-201ENST00000249806 RFTN2Q52LD8 501 aaPredicted RBP21.3■■□□□ 1
CLN6-201ENST00000249806 PRMT9Q6P2P2 845 aa21.3■■□□□ 1
CLN6-201ENST00000249806 SPPL2CQ8IUH8 684 aa21.3■■□□□ 1
CLN6-201ENST00000249806 CATSPER1Q8NEC5 780 aa21.3■■□□□ 1
CLN6-201ENST00000249806 TSPEARQ8WU66 669 aa21.3■■□□□ 1
CLN6-201ENST00000249806 IRF7Q92985 503 aa21.3■■□□□ 1
CLN6-201ENST00000249806 EME1Q96AY2 570 aa21.3■■□□□ 1
CLN6-201ENST00000249806 MCCC1Q96RQ3 725 aaPredicted RBP21.3■■□□□ 1
CLN6-201ENST00000249806 CD244Q9BZW8 370 aa21.3■■□□□ 1
CLN6-201ENST00000249806 YIPF3Q9GZM5 350 aa21.3■■□□□ 1
CLN6-201ENST00000249806 IL23AQ9NPF7 189 aa21.3■■□□□ 1
CLN6-201ENST00000249806 TDP1Q9NUW8 608 aa21.3■■□□□ 1
CLN6-201ENST00000249806 ZDHHC3Q9NYG2 299 aa21.3■■□□□ 1
CLN6-201ENST00000249806 LSM1O15116 133 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 DENRO43583 198 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 C1SP09871 688 aa21.29■■□□□ 1
CLN6-201ENST00000249806 G6PDP11413 515 aa21.29■■□□□ 1
CLN6-201ENST00000249806 TYRP14679 529 aa21.29■■□□□ 1
CLN6-201ENST00000249806 CDKL1Q00532 357 aa21.29■■□□□ 1
CLN6-201ENST00000249806 NR6A1Q15406 480 aa21.29■■□□□ 1
CLN6-201ENST00000249806 FOXB2Q5VYV0 432 aa21.29■■□□□ 1
CLN6-201ENST00000249806 TMEM215Q68D42 235 aa21.29■■□□□ 1
CLN6-201ENST00000249806 UGT2A3Q6UWM9 527 aa21.29■■□□□ 1
CLN6-201ENST00000249806 ISLR2Q6UXK2 745 aa21.29■■□□□ 1
CLN6-201ENST00000249806 IFNEQ86WN2 208 aa21.29■■□□□ 1
CLN6-201ENST00000249806 NAT16Q8N8M0 369 aa21.29■■□□□ 1
CLN6-201ENST00000249806 MRPL43Q8N983 215 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 OR2T34Q8NGX1 318 aa21.29■■□□□ 1
CLN6-201ENST00000249806 OR2T3Q8NH03 318 aa21.29■■□□□ 1
CLN6-201ENST00000249806 PBXIP1Q96AQ6 731 aa21.29■■□□□ 1
CLN6-201ENST00000249806 DUS3LQ96G46 650 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 COPS8Q99627 209 aa21.29■■□□□ 1
CLN6-201ENST00000249806 UBAP1Q9NZ09 502 aa21.29■■□□□ 1
CLN6-201ENST00000249806 PDP2Q9P2J9 529 aa21.29■■□□□ 1
CLN6-201ENST00000249806 B4GALT6Q9UBX8 382 aa21.29■■□□□ 1
CLN6-201ENST00000249806 ANGPTL3Q9Y5C1 460 aa21.29■■□□□ 1
CLN6-201ENST00000249806 FFAR3O14843 346 aa21.29■■□□□ 1
CLN6-201ENST00000249806 GPR42O15529 346 aa21.29■■□□□ 1
CLN6-201ENST00000249806 EEDO75530 441 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 HSD17B1P14061 328 aa21.29■■□□□ 1
CLN6-201ENST00000249806 ZNF26P17031 533 aaPredicted RBP21.29■■□□□ 1
CLN6-201ENST00000249806 HMOX2P30519 316 aa21.29■■□□□ 1
CLN6-201ENST00000249806 CCR7P32248 378 aa21.29■■□□□ 1
CLN6-201ENST00000249806 SOX11P35716 441 aa21.29■■□□□ 1
CLN6-201ENST00000249806 NRF1Q16656 503 aa21.29■■□□□ 1
CLN6-201ENST00000249806 AP5B1Q2VPB7 878 aa21.29■■□□□ 1
CLN6-201ENST00000249806 DET1Q7L5Y6 550 aa21.29■■□□□ 1
CLN6-201ENST00000249806 ADIPOR2Q86V24 386 aa21.29■■□□□ 1
CLN6-201ENST00000249806 TMEM125Q96AQ2 219 aa21.29■■□□□ 1
CLN6-201ENST00000249806 FARSBQ9NSD9 589 aaKnown RBP21.29■■□□□ 1
CLN6-201ENST00000249806 ZIM2Q9NZV7 527 aa21.29■■□□□ 1
CLN6-201ENST00000249806 OPTCQ9UBM4 332 aa21.29■■□□□ 1
CLN6-201ENST00000249806 TMPRSS11EQ9UL52 423 aa21.29■■□□□ 1
CLN6-201ENST00000249806 AP4B1Q9Y6B7 739 aa21.29■■□□□ 1
CLN6-201ENST00000249806 TIPRLO75663 272 aa21.28■■□□□ 1
CLN6-201ENST00000249806 STAMBPO95630 424 aa21.28■■□□□ 1
CLN6-201ENST00000249806 PFKLP17858 780 aa21.28■■□□□ 1
CLN6-201ENST00000249806 IRX1P78414 480 aaPredicted RBP21.28■■□□□ 1
CLN6-201ENST00000249806 NTHL1P78549 312 aa21.28■■□□□ 1
CLN6-201ENST00000249806 GK3PQ14409 553 aa21.28■■□□□ 1
CLN6-201ENST00000249806 PLA2G4EQ3MJ16 856 aa21.28■■□□□ 1
CLN6-201ENST00000249806 LY6G5CQ5SRR4 150 aa21.28■■□□□ 1
CLN6-201ENST00000249806 C6orf52Q5T4I8 152 aa21.28■■□□□ 1
CLN6-201ENST00000249806 SULT1C3Q6IMI6 304 aa21.28■■□□□ 1
CLN6-201ENST00000249806 HMBOX1Q6NT76 420 aa21.28■■□□□ 1
CLN6-201ENST00000249806 KIAA2013Q8IYS2 634 aa21.28■■□□□ 1
CLN6-201ENST00000249806 OR2A12Q8NGT7 310 aa21.28■■□□□ 1
CLN6-201ENST00000249806 SORCS1Q8WY21 1168 aa21.28■■□□□ 1
CLN6-201ENST00000249806 TMEM74Q96NL1 305 aa21.28■■□□□ 1
CLN6-201ENST00000249806 ACTL8Q9H568 366 aa21.28■■□□□ 1
CLN6-201ENST00000249806 COQ10BQ9H8M1 238 aa21.28■■□□□ 1
CLN6-201ENST00000249806 SUN2Q9UH99 717 aa21.28■■□□□ 1
CLN6-201ENST00000249806 CNOT6Q9ULM6 557 aaKnown RBP21.28■■□□□ 1
CLN6-201ENST00000249806 INSL6Q9Y581 213 aa21.28■■□□□ 1
CLN6-201ENST00000249806 NOTCH4Q99466 2003 aa21.28■■□□□ 1
CLN6-201ENST00000249806 RHOP08100 348 aa21.28■■□□□ 1
CLN6-201ENST00000249806 PTPN5P54829 565 aa21.28■■□□□ 1
CLN6-201ENST00000249806 ARHGEF7Q14155 803 aa21.28■■□□□ 1
CLN6-201ENST00000249806 MTX3Q5HYI7 312 aa21.28■■□□□ 1
CLN6-201ENST00000249806 PPWD1Q96BP3 646 aaKnown RBP21.28■■□□□ 1
CLN6-201ENST00000249806 ZNF641Q96N77 438 aaPredicted RBP21.28■■□□□ 1
CLN6-201ENST00000249806 SPHK2Q9NRA0 654 aa21.28■■□□□ 1
CLN6-201ENST00000249806 INTS7Q9NVH2 962 aaKnown RBP21.28■■□□□ 1
CLN6-201ENST00000249806 LEF1Q9UJU2 399 aaPredicted RBP21.28■■□□□ 1
CLN6-201ENST00000249806 RAB26Q9ULW5 256 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms