RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PTGIRP43119 386 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 MAPK9P45984 424 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 CD151P48509 253 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 PLOD1Q02809 727 aaPredicted RBP23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 GPR18Q14330 331 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 RNASEH2BQ5TBB1 312 aaKnown RBP23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 KIAA0930Q6ICG6 404 aaPredicted RBP23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 CASC4Q6P4E1 433 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 MICALCLQ6ZW33 695 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 HOOK3Q86VS8 718 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 KLHL7Q8IXQ5 586 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 IMP3Q9NV31 184 aaKnown RBP23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 FAM8A1Q9UBU6 413 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 PRSS21Q9Y6M0 314 aa23.81■■□□□ 1.4
SDF2L1-201ENST00000248958 AVILO75366 819 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 DR1Q01658 176 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 DHX34Q14147 1143 aaKnown RBP23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 ZNF658BQ4V348 819 aaPredicted RBP23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 MRNIPQ6NTE8 343 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 KLHL35Q6PF15 583 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 XKR5Q6UX68 686 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 SDCCAG8Q86SQ7 713 aaPredicted RBP23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 RAXQ9Y2V3 346 aa23.8■■□□□ 1.4
SDF2L1-201ENST00000248958 FRYQ5TBA9 3013 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 CFAP47Q6ZTR5 3102 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 CDRT15L2A8MXV6 281 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 GOLGA8MH3BSY2 632 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 SMAPO00193 183 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 FANCGO15287 622 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 RRP8O43159 456 aaKnown RBP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 TLX3O43711 291 aaPredicted RBP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 VAPBO95292 243 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 CSTF2P33240 577 aaKnown RBP eCLIP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 MAGEA3P43357 314 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 PCBP4P57723 403 aaKnown RBP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 SEMA3AQ14563 771 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 C16orf72Q14CZ0 275 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 CLEC14AQ86T13 490 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 LRRC6Q86X45 466 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 LILRA3Q8N6C8 439 aaPredicted RBP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 AGBL5Q8NDL9 886 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 ELMO1Q92556 727 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 B3GNT4Q9C0J1 378 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 RAB33BQ9H082 229 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 OR52A5Q9H2C5 316 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 PCDHGA7Q9Y5G6 932 aa23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 MN1Q10571 1320 aaPredicted RBP23.79■■□□□ 1.4
SDF2L1-201ENST00000248958 PRMT5O14744 637 aaPredicted RBP23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 OR1I1O60431 355 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 NDUFS3O75489 264 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 EIF2S3P41091 472 aaKnown RBP23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 KRT33BQ14525 404 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 RNF187Q5TA31 235 aaPredicted RBP23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 LRRC69Q6ZNQ3 347 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 C17orf53Q8N3J3 647 aaPredicted RBP23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 ZNF248Q8NDW4 579 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 GPR150Q8NGU9 434 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 RMDN2Q96LZ7 410 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 TCF12Q99081 682 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 CARD6Q9BX69 1037 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 OGFRQ9NZT2 677 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 TMEM9Q9P0T7 183 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 EPHA6Q9UF33 1036 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 PISDQ9UG56 409 aa23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 CFAP20Q9Y6A4 193 aaKnown RBP23.78■■□□□ 1.4
SDF2L1-201ENST00000248958 A0A087WV48 116 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 NDC80O14777 642 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 TOX3O15405 576 aaPredicted RBP23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 USP1O94782 785 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 C9P02748 559 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 OGNP20774 298 aaKnown RBP23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 RPS3P23396 243 aaKnown RBP eCLIP23.77■■□□□ 1.42e-15■■■□□ 17.5
SDF2L1-201ENST00000248958 CAPZBP47756 277 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 PLCL1Q15111 1095 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 IZUMO3Q5VZ72 239 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 CES3Q6UWW8 571 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 SYT10Q6XYQ8 523 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 ARHGAP22Q7Z5H3 698 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 TMEM135Q86UB9 458 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 JAMLQ86YT9 394 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 OTUD6BQ8N6M0 293 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 RCBTB1Q8NDN9 531 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 SPDYE1Q8NFV5 336 aaPredicted RBP23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 PANX3Q96QZ0 392 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 KIR3DX1Q9H7L2 352 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 MARCH4Q9P2E8 410 aaPredicted RBP23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 GNPTGQ9UJJ9 305 aa23.77■■□□□ 1.4
SDF2L1-201ENST00000248958 ASPMQ8IZT6 3477 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 PRAMEF33A0A0G2JMD5 474 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 ANKRD34CP0C6C1 535 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 HGFP14210 728 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 TYRP1P17643 537 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 MPSTP25325 297 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 ARNTP27540 789 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 ARCN1P48444 511 aaKnown RBP23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 MORF4L2Q15014 288 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 ANKRD20A4Q4UJ75 823 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 TMEM164Q5U3C3 297 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 LMNTD2Q8IXW0 634 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 ZNF669Q96BR6 464 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms