RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GPR78Q96P69 363 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 FICDQ9BVA6 458 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SLC39A8Q9C0K1 460 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 FAM192AQ9GZU8 254 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 SLC25A51Q9H1U9 297 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 AGO3Q9H9G7 860 aaKnown RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 NMRK2Q9NPI5 230 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 TMLHEQ9NVH6 421 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 NCKIPSDQ9NZQ3 722 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CACNG4Q9UBN1 327 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 STK39Q9UEW8 545 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PADI3Q9ULW8 664 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 RUVBL2Q9Y230 463 aaKnown RBP7.84□□□□□ -1.15
CXCR4-201ENST00000241393 CDYLQ9Y232 598 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 POMPQ9Y244 141 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 PTPRDP23468 1912 aa7.84□□□□□ -1.15
CXCR4-201ENST00000241393 NUP205Q92621 2012 aa7.84□□□□□ -1.16
CXCR4-201ENST00000241393 HEATR9A2RTY3 570 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 DPPA5A6NC42 116 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MYADML2A6NDP7 307 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 E9PBE3 544 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TMEM189-UBE2V1I3L0A0 370 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TNPO2O14787 897 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 GRID2O43424 1007 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KLHL41O60662 606 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 VAPBO95292 243 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 BAG2O95816 211 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PENKP01210 267 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 HLA-DQB2P05538 268 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 HSPA1AP0DMV8 641 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 HSPA1BP0DMV9 641 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CYBAP13498 195 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 ATP5F1P24539 256 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 RENBPP51606 427 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 NAGLUP54802 743 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 GALNT1Q10472 559 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MTA1Q13330 715 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 RTP5Q14D33 572 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PSMD5Q16401 504 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 NEPROQ6NW34 567 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 ZFP1Q6P2D0 407 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KDELC1Q6UW63 502 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 IZUMO2Q6UXV1 221 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CTU1Q7Z7A3 348 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KBTBD6Q86V97 674 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MON1AQ86VX9 555 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SPATA2LQ8IUW3 424 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LYSMD2Q8IV50 215 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CARFQ8N187 725 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 UMODL1-AS1Q8N2C9 162 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 ACVR1CQ8NER5 493 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SPATA22Q8NHS9 363 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TSPEARQ8WU66 669 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KCTD4Q8WVF5 259 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 GCDHQ92947 438 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PEX13Q92968 403 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CLIP3Q96DZ5 547 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LCORQ96JN0 433 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MAELQ96JY0 434 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PGLYRP2Q96PD5 576 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LENG8Q96PV6 779 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TRAPPC9Q96Q05 1148 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 BTBD9Q96Q07 612 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 OR52B2Q96RD2 323 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PAAF1Q9BRP4 392 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 FSD1LQ9BXM9 530 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SIK2Q9H0K1 926 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 RBM22Q9NW64 420 aaKnown RBP eCLIP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CLIC5Q9NZA1 410 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CPSF2Q9P2I0 782 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 XPR1Q9UBH6 696 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 EVLQ9UI08 416 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CDC42EP3Q9UKI2 254 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 FBXO5Q9UKT4 447 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SCML2Q9UQR0 700 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 ASB3Q9Y575 518 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 E9PAM4 449 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PHGDHO43175 533 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 NEBLO76041 1014 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MT-CYBP00156 380 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PGK1P00558 417 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CHRNGP07510 517 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 RBP1P09455 135 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 C5AR1P21730 350 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PAX7P23759 505 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CDC25CP30307 473 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SLC1A2P43004 574 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 BRCC3P46736 316 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TUBP50607 506 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SLC12A2P55011 1212 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 YWHAHQ04917 246 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MSLNQ13421 630 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LAMB3Q13751 1172 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CYLC2Q14093 348 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 BTG3Q14201 252 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 POU6F1Q14863 301 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SMAD1Q15797 465 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 GPR162Q16538 588 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms