RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 LETMD1Q6P1Q0 360 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 ZNF548Q8NEK5 533 aaPredicted RBP15.29■□□□□ 0.04
DDX55-201ENST00000238146 OR10A6Q8NH74 314 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 SLC39A13Q96H72 371 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PCDH12Q9NPG4 1184 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 C3orf18Q9UK00 162 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PMF1-BGLAPU3KQ54 211 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 GSTA4O15217 222 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 SLC22A1O15245 554 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 KATNA1O75449 491 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 E2F6O75461 281 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 B3GAT3O94766 335 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 TSPAN12O95859 305 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 CHRNA1P02708 482 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 GJA5P36382 358 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PSEN2P49810 448 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PGS1Q32NB8 556 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PAGE2BQ5JRK9 111 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 METTL23Q86XA0 190 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 HASPINQ8TF76 798 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 ZNF382Q96SR6 550 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 ALOXE3Q9BYJ1 711 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 IKZF5Q9H5V7 419 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 FBXO8Q9NRD0 319 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 PCDHGB1Q9Y5G3 927 aa15.29■□□□□ 0.04
DDX55-201ENST00000238146 M0R3G1 203 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 PRKD3O94806 890 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 NADKO95544 446 aaPredicted RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 CCDC159P0C7I6 412 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 ACVR2AP27037 513 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 ALDH4A1P30038 563 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 RPL9P32969 192 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 DCTP40126 519 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 PBX3P40426 434 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 LSM3P62310 102 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 CDK5R2Q13319 367 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 PRAMEF19Q5SWL8 479 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 IL27RAQ6UWB1 636 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 NKAPQ8N5F7 415 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 CNIH3Q8TBE1 160 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 RHBDF1Q96CC6 855 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 CDCA5Q96FF9 252 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 POLR1EQ9GZS1 481 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 FBXO10Q9UK96 956 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 EPOP01588 193 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 CAPN1P07384 714 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 RYKP34925 604 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 IL10RBQ08334 325 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 KIAA0040Q15053 153 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 MAPRE1Q15691 268 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 PTPRNQ16849 979 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 FKBP9P1Q75LS8 142 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 METTL6Q8TCB7 284 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 IGSF8Q969P0 613 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 BCL7BQ9BQE9 202 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 THUMPD3Q9BV44 507 aaKnown RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 CD274Q9NZQ7 290 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 TMEFF2Q9UIK5 374 aaPredicted RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 RIMKLBQ9ULI2 386 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 TSC22D4Q9Y3Q8 395 aa15.28■□□□□ 0.04
DDX55-201ENST00000238146 POLR3HQ9Y535 204 aaPredicted RBP15.28■□□□□ 0.04
DDX55-201ENST00000238146 LSM1O15116 133 aaKnown RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 NDUFS3O75489 264 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 CYP11A1P05108 521 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 PABPC1P11940 636 aaKnown RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 CD6P30203 668 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 CDKN1CP49918 316 aaPredicted RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 NR6A1Q15406 480 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 RFTN2Q52LD8 501 aaPredicted RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 AGMOQ6ZNB7 445 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 PLEKHG7Q6ZR37 379 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 DSG4Q86SJ6 1040 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 GPSM1Q86YR5 675 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 DCP2Q8IU60 420 aaKnown RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 ZCCHC7Q8N3Z6 543 aaKnown RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 FBLIM1Q8WUP2 373 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 EEF1AKMT1Q8WVE0 214 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 RORBQ92753 470 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 GLMNQ92990 594 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 ZNF566Q969W8 418 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 NECTIN3Q9NQS3 549 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 INTS6Q9UL03 887 aaKnown RBP15.27■□□□□ 0.04
DDX55-201ENST00000238146 DOCK4Q8N1I0 1966 aa15.27■□□□□ 0.04
DDX55-201ENST00000238146 ANKRD36A6QL64 1941 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 HAS3O00219 553 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 IFRD1O00458 451 aaPredicted RBP15.27■□□□□ 0.03
DDX55-201ENST00000238146 SLC16A6O15403 523 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 ARL1P40616 181 aaPredicted RBP15.27■□□□□ 0.03
DDX55-201ENST00000238146 VBP1P61758 197 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 RAPSNQ13702 412 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 ACOX1Q15067 660 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 DGUOKQ16854 277 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 AP5B1Q2VPB7 878 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 SIDT2Q8NBJ9 832 aaKnown RBP15.27■□□□□ 0.03
DDX55-201ENST00000238146 OR5K1Q8NHB7 308 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 GIPC2Q8TF65 315 aa15.27■□□□□ 0.03
DDX55-201ENST00000238146 ITCHQ96J02 903 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms