RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MAOBP27338 520 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 GLUD2P49448 558 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 HOXA1P49639 335 aaPredicted RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 LIMK1P53667 647 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RAPSNQ13702 412 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 BAK1Q16611 211 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ARMCX4Q5H9R4 360 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 PIWIL4Q7Z3Z4 852 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 PROSER1Q86XN7 944 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ASB15Q8WXK1 588 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 FCRL3Q96P31 734 aaPredicted RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 ASAH2Q9NR71 780 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RUVBL2Q9Y230 463 aaKnown RBP12.85□□□□□ -0.35
MSH2-201ENST00000233146 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
MSH2-201ENST00000233146 RPS10-NUDT3A0A1W2PQS6 291 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 WDPCPO95876 746 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 SERPINF2P08697 491 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 ALDOCP09972 364 aaKnown RBP12.84□□□□□ -0.35
MSH2-201ENST00000233146 RAP2AP10114 183 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 RRASP10301 218 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 TAF1P21675 1872 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 BRCC3P46736 316 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 PCBP1Q15365 356 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSH2-201ENST00000233146 STXBP2Q15833 593 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 GRK1Q15835 563 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 RABL3Q5HYI8 236 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 SPANXN3Q5MJ09 141 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 HS3ST5Q8IZT8 346 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
MSH2-201ENST00000233146 SGTBQ96EQ0 304 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 AGAP2Q99490 1192 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 ZNF416Q9BWM5 594 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 FBRSL1Q9HCM7 1045 aaKnown RBP12.84□□□□□ -0.35
MSH2-201ENST00000233146 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 OAS3Q9Y6K5 1087 aaKnown RBP12.84□□□□□ -0.35
MSH2-201ENST00000233146 TRAV6A0A075B6T7 132 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 BCKDKO14874 412 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 CYP11A1P05108 521 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
MSH2-201ENST00000233146 TNFSF8P32971 234 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 BMP8BP34820 402 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 ASAH1Q13510 395 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 POU4F3Q15319 338 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 KDM4DQ6B0I6 523 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 LPAR1Q92633 364 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 FOXJ1Q92949 421 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 SHARPINQ9H0F6 387 aa12.84□□□□□ -0.35
MSH2-201ENST00000233146 M0R082 166 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 APOL1O14791 398 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 SH3BP5O60239 455 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 TSC22D2O75157 780 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 CPN2P22792 545 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 SOX11P35716 441 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 GSTO1P78417 241 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 RBP5P82980 135 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 SEMA3AQ14563 771 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 CYHR1Q6ZMK1 362 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 LIMS2Q7Z4I7 341 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 ZC3HC1Q86WB0 502 aaKnown RBP12.83□□□□□ -0.35
MSH2-201ENST00000233146 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.35
MSH2-201ENST00000233146 HYLS1Q96M11 299 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 MRM3Q9HC36 420 aaKnown RBP12.83□□□□□ -0.35
MSH2-201ENST00000233146 CCNB1IP1Q9NPC3 277 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 TJP2Q9UDY2 1190 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 MAPRE3Q9UPY8 281 aa12.83□□□□□ -0.35
MSH2-201ENST00000233146 SMLR1H3BR10 107 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 DFFAO00273 331 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 TNFRSF21O75509 655 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 HTR1EP28566 365 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 GRK5P34947 590 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 PPP3CCP48454 512 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 MAPKAPK2P49137 400 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 EEFSECP57772 596 aaKnown RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 PTCHD3Q3KNS1 767 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 ZC3H12BQ5HYM0 836 aaKnown RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 B3GNT9Q6UX72 402 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 OR7G3Q8NG95 312 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 TNPO3Q9Y5L0 923 aaKnown RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 CITO14578 2027 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 A0A1W2PQ09 198 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 F8W036 122 aa12.83□□□□□ -0.36
MSH2-201ENST00000233146 ASS1P00966 412 aaKnown RBP12.83□□□□□ -0.36
MSH2-201ENST00000233146 SLC2A3P11169 496 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms