RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 CCDC121Q6ZUS5 278 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 DET1Q7L5Y6 550 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 SLC22A9Q8IVM8 553 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
TTC1-201ENST00000231238 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 MYO1HQ8N1T3 1032 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 AFAP1L2Q8N4X5 818 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 TRAM1L1Q8N609 369 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 CLDN19Q8N6F1 224 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 STAG3L4Q8TBR4 150 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 SKA2Q8WVK7 121 aaPredicted RBP9.61□□□□□ -0.87
TTC1-201ENST00000231238 ANKRD49Q8WVL7 239 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 INPP5DQ92835 1189 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 TP53INP1Q96A56 240 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 LINGO1Q96FE5 620 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 BIRC8Q96P09 236 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 CDX2Q99626 313 aaPredicted RBP9.61□□□□□ -0.87
TTC1-201ENST00000231238 BOCQ9BWV1 1114 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 FBRSQ9HAH7 460 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 CYP4F12Q9HCS2 524 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 MARCOQ9UEW3 520 aaPredicted RBP9.61□□□□□ -0.87
TTC1-201ENST00000231238 DCTN4Q9UJW0 460 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 COQ6Q9Y2Z9 468 aa9.61□□□□□ -0.87
TTC1-201ENST00000231238 OAS3Q9Y6K5 1087 aaKnown RBP9.61□□□□□ -0.87
TTC1-201ENST00000231238 TRBV5-4A0A0C4DH59 114 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 PRR23AA6NEV1 266 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 IQCF5A8MTL0 148 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 TMEM114B3SHH9 223 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 G3V2L1 256 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 K7EQS6 105 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 QSOX1O00391 747 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 INPP4BO15327 924 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 DYRK3O43781 588 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 ZBTB14O43829 449 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 C6P13671 934 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 CD1DP15813 335 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 DGKAP23743 735 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 P2RY2P41231 377 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 ARFIP2P53365 341 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 METAP1P53582 386 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 NAGLUP54802 743 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 RALGDSQ12967 914 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 IFT88Q13099 833 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 CAMK2GQ13555 558 aaPredicted RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 GTF2H3Q13889 308 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 TTC31Q49AM3 519 aaPredicted RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 SYTL3Q4VX76 610 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 TECRLQ5HYJ1 363 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 LDLRAP1Q5SW96 308 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 Q6ZS46 218 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 PIGWQ7Z7B1 504 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 PHYKPLQ8IUZ5 450 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 CPNE9Q8IYJ1 553 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 ZBTB2Q8N680 514 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 TXNDC5Q8NBS9 432 aaKnown RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 OR2T3Q8NH03 318 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 PHF21BQ96EK2 531 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 MSANTD3Q96H12 275 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 UBXN10Q96LJ8 280 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 DMRTB1Q96MA1 342 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 C7orf26Q96N11 449 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 DERL2Q9GZP9 239 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 P2RY12Q9H244 342 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 TRPV5Q9NQA5 729 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 SPATS2LQ9NUQ6 558 aaKnown RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 OXSMQ9NWU1 459 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 NCKIPSDQ9NZQ3 722 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 NDRG2Q9UN36 371 aaKnown RBP9.6□□□□□ -0.87
TTC1-201ENST00000231238 NCKAP1Q9Y2A7 1128 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
TTC1-201ENST00000231238 NPEPPSL1A6NEC2 478 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 HGSO14964 777 aaPredicted RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 KPNA5O15131 536 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 TSPAN6O43657 245 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 DLX3O60479 287 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 MTX2O75431 263 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 LYPLA1O75608 230 aaPredicted RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 TM7SF2O76062 418 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 RECQL5O94762 991 aaPredicted RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 FTH1P02794 183 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 ATP1B2P14415 290 aaPredicted RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 GLULP15104 373 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 KIR2DL1P43626 348 aaPredicted RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 CSRP3P50461 194 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 MRPS21P82921 87 aaKnown RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 FBXO43Q4G163 708 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 TMEM196Q5HYL7 178 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 EOGTQ5NDL2 527 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 TMEM207Q6UWW9 146 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 KIAA1324Q6UXG2 1013 aaKnown RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 MACC1Q6ZN28 852 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 Q7L0L9 218 aa9.59□□□□□ -0.87
TTC1-201ENST00000231238 PIWIL4Q7Z3Z4 852 aaKnown RBP9.59□□□□□ -0.87
TTC1-201ENST00000231238 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms