RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SCELO95171 688 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 POP4O95707 220 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 IL12BP29460 328 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 YAP1P46937 504 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ZFP69Q49AA0 526 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 LCN1P1Q5VSP4 162 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF781Q8N8C0 355 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 C1orf127Q8N9H9 656 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 OR7D4Q8NG98 312 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ZCCHC10Q8TBK6 192 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 GTPBP3Q969Y2 492 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 MAGEH1Q9H213 219 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 SHPRHQ149N8 1683 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 FAM172BPA6NC97 362 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 MAGEB17A8MXT2 336 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PTGIRP43119 386 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 SEPHS1P49903 392 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 GALK1P51570 392 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PNLIPRP1P54315 467 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 CDH12P55289 794 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 MINDY4Q4G0A6 757 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 RASSF6Q6ZTQ3 369 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 SVOPLQ8N434 492 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 NKD2Q969F2 451 aaPredicted RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PCED1BQ96HM7 432 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 CCDC59Q9P031 241 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 TBC1D24Q9ULP9 559 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 CPSF4LA6NMK7 179 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 hCG_2039718K7EN88 272 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 KERAO60938 352 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 GPIP06744 558 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 NCK1P16333 377 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PDHA2P29803 388 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ARL2P36404 184 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 FSTL4Q6MZW2 842 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 TAC4Q86UU9 113 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ANKRD46Q86W74 232 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 JSRP1Q96MG2 331 aaPredicted RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF570Q96NI8 536 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 ACBD6Q9BR61 282 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 EIF2B4Q9UI10 523 aaKnown RBP11.41□□□□□ -0.58
LAMA4-201ENST00000230538 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 MAN2B2Q9Y2E5 1009 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 GRIP1Q9Y3R0 1128 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 TESMINQ9Y4I5 508 aa11.41□□□□□ -0.58
LAMA4-201ENST00000230538 PIP5K1BO14986 540 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 CCNKO75909 580 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PGRP06401 933 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 C8GP07360 202 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.58
LAMA4-201ENST00000230538 GNALP38405 381 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 AP3S2P59780 193 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 ZZZ3Q8IYH5 903 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 ROPN1LQ96C74 230 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TRIM2Q9C040 744 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 CHMP1AQ9HD42 196 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TIMMDC1Q9NPL8 285 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PCDHA2Q9Y5H9 948 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 ARL5CA6NH57 179 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 WRBO00258 174 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 ENPP3O14638 875 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 L1CAMP32004 1257 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PPP3R1P63098 170 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 SLC20A2Q08357 652 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 UBXN11Q5T124 520 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 FUT10Q6P4F1 479 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 NRSN1Q8IZ57 195 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 LEMD2Q8NC56 503 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 LCN9Q8WX39 176 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PCDHGA3Q9Y5H0 932 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 E7ENX8 843 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 SYN3O14994 580 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 NME6O75414 186 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PAPSS2O95340 614 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-201ENST00000230538 PBX3P40426 434 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TYSND1Q2T9J0 566 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TNFAIP8L3Q5GJ75 292 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TMEM192Q8IY95 271 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 CBR4Q8N4T8 237 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 CENPNQ96H22 339 aaPredicted RBP11.4□□□□□ -0.58
LAMA4-201ENST00000230538 GAL3ST4Q96RP7 486 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 A0A075B6Q4 140 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 AREL1O15033 823 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TPST2O60704 377 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 CASP9P55211 416 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 SMU1Q2TAY7 513 aa11.4□□□□□ -0.58
LAMA4-201ENST00000230538 TMEM220Q6QAJ8 160 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms