RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SLC39A13Q96H72 371 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MAGED4Q96JG8 741 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PRDM5Q9NQX1 630 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ACTR3BQ9P1U1 418 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MED16Q9Y2X0 877 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ASB1Q9Y576 335 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 GPR45Q9Y5Y3 372 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MYO16Q9Y6X6 1858 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 A0A0U1RQS6 177 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 LOC285095A0A1B0GVY8 99 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PDZK1P1A8MUH7 402 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TFECO14948 347 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 SOAT2O75908 522 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 CYP11A1P05108 521 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PSMB9P28065 219 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 GTF2E2P29084 291 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 INPP5AQ14642 412 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 BEND5Q7L4P6 421 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 STK32CQ86UX6 486 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 GOLM1Q8NBJ4 401 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRPV3Q8NET8 790 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PMM1Q92871 262 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 CENPNQ96H22 339 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF347Q96SE7 839 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 CYP2S1Q96SQ9 504 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 HBEGFQ99075 208 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC30A3Q99726 388 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 BEX2Q9BXY8 128 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZYG11BQ9C0D3 744 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ALG2Q9H553 416 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 NANOGQ9H9S0 305 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 BBIP1A8MTZ0 92 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 M0QZQ0 153 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 POLR2IP36954 125 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TBX4P57082 545 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 VBP1P61758 197 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 LIPEQ05469 1076 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRIM32Q13049 653 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 NFYCQ13952 458 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PTPRRQ15256 657 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 ATP6AP1Q15904 470 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MORN1Q5T089 497 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PLD3Q8IV08 490 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 SERPINB11Q96P15 392 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PPP1R2P1Q96PQ5 205 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TTYH2Q9BSA4 534 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 FNDC3AQ9Y2H6 1198 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 MAGED1Q9Y5V3 778 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 PCM1Q15154 2024 aa9.28□□□□□ -0.92
HLA-DOA-201ENST00000229829 TDRD15B5MCY1 1934 aaKnown RBP9.27□□□□□ -0.92
HLA-DOA-201ENST00000229829 WASH4PA8MWX3 477 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 NAT2P11245 290 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 IL12AP29459 219 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLC26A3P40879 764 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 IFITM3Q01628 133 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 COLEC12Q5KU26 742 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 DCP1BQ8IZD4 617 aaKnown RBP9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 SFRP1Q8N474 314 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 NATD1Q8N6N6 113 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR2T11Q8NH01 316 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR4L1Q8NH43 312 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 C1orf74Q96LT6 269 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MUS81Q96NY9 551 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 CDK15Q96Q40 435 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLC7A5P2Q9GIP4 190 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MAGEE1Q9HCI5 957 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 LTB4R2Q9NPC1 389 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRDM8Q9NQV8 689 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 GMIPQ9P107 970 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 ECI2O75521 394 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIM16O95361 564 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MATN4O95460 622 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 ALOX5P09917 674 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 RHOQP17081 205 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 HTR7P34969 479 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 YWHAHQ04917 246 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 CYBRD1Q53TN4 286 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 BROXQ5VW32 411 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MSANTD2Q6P1R3 559 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 RAB44Q7Z6P3 723 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 GALNT7Q86SF2 657 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 SYVN1Q86TM6 617 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 LRRC49Q8IUZ0 686 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MICU2Q8IYU8 434 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 THEM5Q8N1Q8 247 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 CFAP52Q8N1V2 620 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 ELMOD1Q8N336 334 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 CADM2Q8N3J6 435 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 FBXO39Q8N4B4 442 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TEX26Q8N6G2 289 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 FLCNQ8NFG4 579 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 EXOC2Q96KP1 924 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPOCK3Q9BQ16 436 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1277.6 ms