RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ACSL5Q9ULC5 683 aa12.41□□□□□ -0.42
LSM5-201ENST00000223084 IGHV5-10-1A0A0J9YXX1 117 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 C17orf113A0A1B0GUU1 675 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 FAM237BA0A1B0GVD1 139 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 KLHL33A6NCF5 533 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 LILRA5A6NI73 299 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 DUX1O43812 170 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 SLC35G4P0C7Q5 338 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 MTHFD1P11586 935 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 HGFP14210 728 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 CCKBRP32239 447 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 ITGA8P53708 1063 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 GPLD1P80108 840 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 DHX34Q14147 1143 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 AARS2Q5JTZ9 985 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 SNAP47Q5SQN1 464 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 KIAA0930Q6ICG6 404 aaPredicted RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 CAPRIN2Q6IMN6 1127 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 PCGF5Q86SE9 256 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 KRT222Q8N1A0 295 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 RCBTB1Q8NDN9 531 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 ELMO1Q92556 727 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 ZNF592Q92610 1267 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 CCDC74BQ96LY2 380 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 STRADBQ9C0K7 418 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 VPS37BQ9H9H4 285 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 POLR1BQ9H9Y6 1135 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 OGFRQ9NZT2 677 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 RALYQ9UKM9 306 aaKnown RBP12.4□□□□□ -0.42
LSM5-201ENST00000223084 ZMIZ1Q9ULJ6 1067 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 SNX24Q9Y343 169 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
LSM5-201ENST00000223084 CCDC187A0A096LP49 1063 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 ZCWPW2A0A1B0GU75 182 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 A8MU76 341 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 HAX1O00165 279 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 PRMT5O14744 637 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 RAD51CO43502 376 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 NDUFS3O75489 264 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 FTH1P02794 183 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 OR56A5P0C7T3 313 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 AMD1P17707 334 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 PPARGP37231 505 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 RPL21P46778 160 aaKnown RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 LSSP48449 732 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 TTPAP49638 278 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 LIMK2P53671 638 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 EPHA4P54764 986 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 CSE1LP55060 971 aaKnown RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 SQSTM1Q13501 440 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 C16orf72Q14CZ0 275 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 BBS9Q3SYG4 887 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 HIBCHQ6NVY1 386 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 NEPROQ6NW34 567 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 TMEM71Q6P5X7 295 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 TMEM135Q86UB9 458 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 IGDCC3Q8IVU1 814 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 UNC5BQ8IZJ1 945 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 FBXO39Q8N4B4 442 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 PHC3Q8NDX5 983 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 OR4D9Q8NGE8 314 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 WDR36Q8NI36 951 aaKnown RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 LIN37Q96GY3 246 aaPredicted RBP12.39□□□□□ -0.43
LSM5-201ENST00000223084 OR52A5Q9H2C5 316 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
LSM5-201ENST00000223084 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 TMX2-CTNND1H3BSU7 103 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 TP73O15350 636 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 TLX3O43711 291 aaPredicted RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 USP1O94782 785 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 UBXN7O94888 489 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 THRAP10827 490 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 PAMP19021 973 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 ITIH1P19827 911 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 CCR7P32248 378 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 ETV5P41161 510 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 GFERP55789 205 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 BOP1Q14137 746 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 MORF4L2Q15014 288 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 CLPPQ16740 277 aaPredicted RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 TYSND1Q2T9J0 566 aa12.38□□□□□ -0.43
LSM5-201ENST00000223084 DNAJC21Q5F1R6 531 aaKnown RBP12.38□□□□□ -0.43
LSM5-201ENST00000223084 ARMC3Q5W041 872 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms