RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CHDHQ8NE62 594 aaPredicted RBP18.24■□□□□ 0.51
CACTIN-201ENST00000221899 OR4F6Q8NGB9 312 aa18.24■□□□□ 0.51
CACTIN-201ENST00000221899 CNDP2Q96KP4 475 aaKnown RBP18.24■□□□□ 0.51
CACTIN-201ENST00000221899 ZNF382Q96SR6 550 aa18.24■□□□□ 0.51
CACTIN-201ENST00000221899 CINPQ9BW66 212 aaPredicted RBP18.24■□□□□ 0.51
CACTIN-201ENST00000221899 CCDC90BQ9GZT6 254 aa18.24■□□□□ 0.51
CACTIN-201ENST00000221899 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
CACTIN-201ENST00000221899 ADGRE2Q9UHX3 823 aa18.24■□□□□ 0.51
CACTIN-201ENST00000221899 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
CACTIN-201ENST00000221899 IQCA1LA6NCM1 817 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 C2orf81A6NN90 581 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 FFAR3O14843 346 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 LSM1O15116 133 aaKnown RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GPR42O15529 346 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 PRSS23O95084 383 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 HOXD9P28356 352 aaPredicted RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 RPL38P63173 70 aaKnown RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 MGAT3Q09327 533 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 PWP1Q13610 501 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GTF2IRD2BQ6EKJ0 949 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 FRA10AC1Q70Z53 315 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GOLGA7Q7Z5G4 137 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GTF2IRD2Q86UP8 949 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 IGFN1Q86VF2 1251 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 OR10Q1Q8NGQ4 319 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 HEBP1Q9NRV9 189 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 SMPD4Q9NXE4 827 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 PDE10AQ9Y233 779 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 U3KQV3 271 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 TBC1D4O60343 1298 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GUCA1CO95843 209 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 SLC2A4P14672 509 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 TACR2P21452 398 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GSTM2P28161 218 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 YBEYP58557 167 aaPredicted RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 KCNAB2Q13303 367 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 TAF1AQ15573 450 aaPredicted RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 RGS21Q2M5E4 152 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 C6orf141Q5SZD1 244 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 TMCO5AQ8N6Q1 288 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 TRUB1Q8WWH5 349 aaKnown RBP18.23■□□□□ 0.51
CACTIN-201ENST00000221899 GNPTGQ9UJJ9 305 aa18.23■□□□□ 0.51
CACTIN-201ENST00000221899 HS6ST1O60243 411 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SULT1C4O75897 302 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 NPPAP01160 153 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 PRLP01236 227 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 OPRL1P41146 370 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 OR1G1P47890 313 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 CD47Q08722 323 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SFSWAPQ12872 951 aaKnown RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SKIV2LQ15477 1246 aaKnown RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 RBM48Q5RL73 367 aaKnown RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 CRTC3Q6UUV7 619 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SERINC5Q86VE9 423 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ZNF555Q8NEP9 628 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 CHPT1Q8WUD6 406 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 CCDC97Q96F63 343 aaPredicted RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SLC47A1Q96FL8 570 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ITCHQ96J02 903 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 INIPQ9NRY2 104 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SLC30A1Q9Y6M5 507 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 GBF1Q92538 1859 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 OR7A17O14581 309 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 TOR1BO14657 336 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ANKRD28O15084 1053 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 BCAS1O75363 584 aaPredicted RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 INMTO95050 263 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ITGB6P18564 788 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 HTR1BP28222 390 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 CBX2Q14781 532 aaPredicted RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 DPY19L1Q2PZI1 675 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 GTDC1Q4AE62 458 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 SNX29P2Q8IUI4 249 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 RNF168Q8IYW5 571 aaPredicted RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ABHD11Q8NFV4 315 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 FRS2Q8WU20 508 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 FAM162AQ96A26 154 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 MGME1Q9BQP7 344 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 GPN2Q9H9Y4 310 aaPredicted RBP18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ZFP14Q9HCL3 533 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 BAG5Q9UL15 447 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 ERGIC3Q9Y282 383 aa18.22■□□□□ 0.51
CACTIN-201ENST00000221899 DYTNA2CJ06 578 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 PRKD3O94806 890 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 SLC6A4P31645 630 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 IDUAP35475 653 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 ILF2Q12905 390 aaKnown RBP18.21■□□□□ 0.51
CACTIN-201ENST00000221899 TUBA3CQ13748 450 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 FAM174BQ3ZCQ3 159 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 TTC23Q5W5X9 447 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 TMEM179BQ7Z7N9 219 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 PHACTR4Q8IZ21 702 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 HDAC2Q92769 488 aaKnown RBP18.21■□□□□ 0.51
CACTIN-201ENST00000221899 NCLNQ969V3 563 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 AURKBQ96GD4 344 aaPredicted RBP18.21■□□□□ 0.51
CACTIN-201ENST00000221899 ACTR8Q9H981 624 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 TRPM7Q96QT4 1865 aa18.21■□□□□ 0.51
CACTIN-201ENST00000221899 INSIG1O15503 277 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms