RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RPS9P46781 194 aaKnown RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 RPS6KA3P51812 740 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 CACNG1Q06432 222 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 ARHGEF7Q14155 803 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 GTDC1Q4AE62 458 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 PABPC1LQ4VXU2 614 aaKnown RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 DLEU7Q6UYE1 221 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 RFLNAQ6ZTI6 216 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 TSPAN33Q86UF1 283 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 STK32CQ86UX6 486 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 PHACTR4Q8IZ21 702 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 SLC22A15Q8IZD6 547 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF382Q96SR6 550 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 BRINP2Q9C0B6 783 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 WWOXQ9NZC7 414 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 LSM1O15116 133 aaKnown RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 B3GALT4O96024 378 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 GSNP06396 782 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 GJA1P17302 382 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 ELK4P28324 431 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 CTBSQ01459 385 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 EMX2Q04743 252 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 FAM174BQ3ZCQ3 159 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 SLC36A3Q495N2 470 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 PDCD4Q53EL6 469 aaKnown RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 INTS11Q5TA45 600 aaKnown RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 GPR107Q5VW38 600 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 GPR141Q7Z602 305 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 CLEC4FQ8N1N0 589 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 B4GALNT2Q8NHY0 566 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 KLF16Q9BXK1 252 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-201ENST00000221232 P2RY12Q9H244 342 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 IL26Q9NPH9 171 aa14.39□□□□□ -0.11
CNOT3-201ENST00000221232 UPK3BL1B0FP48 263 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 UPK3BL2E5RIL1 263 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 SEC22BO75396 215 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 RASAL1O95294 804 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 GPIP06744 558 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 VARSP26640 1264 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 ALDH3B2P48448 385 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CHRNA6Q15825 494 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CPSF6Q16630 551 aaKnown RBP eCLIP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 LHX8Q68G74 356 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 DET1Q7L5Y6 550 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 DNAJB7Q7Z6W7 309 aaPredicted RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 SEPT8Q92599 483 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 AURKBQ96GD4 344 aaPredicted RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 MYO19Q96H55 970 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CGREF1Q99674 301 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 LRRC3Q9BY71 257 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 IKZF5Q9H5V7 419 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 PRM3Q9NNZ6 103 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 SMPD3Q9NY59 655 aaPredicted RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 SRRDQ9UH36 339 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 LOC730098B7Z3J9 87 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 GSTA4O15217 222 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 NOBOXO60393 691 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 INHAP05111 366 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 TCF3P15923 654 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 HNF1BP35680 557 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 GALK1P51570 392 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CLCN2P51788 898 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 NEK2P51955 445 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 PMS2P3Q13401 168 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 ADRM1Q16186 407 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 AARS2Q5JTZ9 985 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 ENPP6Q6UWR7 440 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 EFL1Q7Z2Z2 1120 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 ITFG1Q8TB96 612 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 GFM2Q969S9 779 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 PLD4Q96BZ4 506 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 MUS81Q96NY9 551 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 NAA50Q9GZZ1 169 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CARS2Q9HA77 564 aaKnown RBP14.38□□□□□ -0.11
CNOT3-201ENST00000221232 LIMD1Q9UGP4 676 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 CRLS1Q9UJA2 301 aa14.38□□□□□ -0.11
CNOT3-201ENST00000221232 RAD51BO15315 384 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF7P17097 686 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 MYF6P23409 242 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 HMGCLP35914 325 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 CLCN4P51793 760 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ESRRGP62508 458 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 CYBRD1Q53TN4 286 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ANKRD46Q86W74 232 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 MFSD2AQ8NA29 543 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PIH1D2Q8WWB5 315 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 EZH1Q92800 747 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 POLR1BQ9H9Y6 1135 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 SMURF2Q9HAU4 748 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PFDN4Q9NQP4 134 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ZIM2Q9NZV7 527 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PADI4Q9UM07 663 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 A0A087WXM4 84 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms