RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DAOAP59103 153 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 UBE3AQ05086 875 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 DPY19L1Q2PZI1 675 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 FAM72AQ5TYM5 149 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 FAM72DQ6L9T8 149 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 FAM72BQ86X60 149 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 COLGALT1Q8NBJ5 622 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ST13P5Q8NFI4 369 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 SLC7A14Q8TBB6 771 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 AGR3Q8TD06 166 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 MAGEE2Q8TD90 523 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 DEDD2Q8WXF8 326 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 TRAF4Q9BUZ4 470 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 RANGRFQ9HD47 186 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 TRMT6Q9UJA5 497 aaKnown RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 AGAP5A6NIR3 686 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 FAM159BA6NKW6 160 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 TPST1O60507 370 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 GP5P40197 560 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 LETMD1Q6P1Q0 360 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 PNCKQ6P2M8 343 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 KIAA1324Q6UXG2 1013 aaKnown RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 GHITMQ9H3K2 345 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 PRDM12Q9H4Q4 367 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF385DQ9H6B1 395 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 AGO3Q9H9G7 860 aaKnown RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 POLR3BQ9NW08 1133 aaPredicted RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 H0YAE9 185 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 EEF2KO00418 725 aaKnown RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 DCLK1O15075 740 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 SULT1B1O43704 296 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 IFNA14P01570 189 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 HMGN1P05114 100 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 RETP07949 1114 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 HTR1AP08908 422 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF250P15622 560 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 STMN1P16949 149 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 ITGALP20701 1170 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 ADRA1BP35368 520 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 GLUD2P49448 558 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
GABPB1-201ENST00000220429 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 FAM209BQ5JX69 171 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 TIFABQ6ZNK6 161 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 PRSS48Q7RTY5 328 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 PRSS42Q7Z5A4 293 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 SLC6A17Q9H1V8 727 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 SNX5Q9Y5X3 404 aa13.44□□□□□ -0.26
GABPB1-201ENST00000220429 KPNA6O60684 536 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 USP17L7P0C7H9 530 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CYBAP13498 195 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 IL10P22301 178 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 ERP29P30040 261 aaKnown RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CSTF2P33240 577 aaKnown RBP eCLIP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CRADDP78560 199 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SCRN3Q0VDG4 424 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CRHR2Q13324 411 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 GPR50Q13585 617 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 PLCZ1Q86YW0 608 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 MICU2Q8IYU8 434 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 UNC5BQ8IZJ1 945 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 FNDC5Q8NAU1 212 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 PIH1D1Q9NWS0 290 aaKnown RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF99A8MXY4 864 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 HHLA1C9JL84 531 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 ADAM11O75078 769 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 POU3F3P20264 500 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 PSMB4P28070 264 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SHMT2P34897 504 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SERPINB9P50453 376 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 PIGFQ07326 219 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 DDR2Q16832 855 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 TMEM198Q66K66 360 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF517Q6ZMY9 492 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SERINC5Q86VE9 423 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CMTR2Q8IYT2 770 aaKnown RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CCNYQ8ND76 341 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SLC45A3Q96JT2 553 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 SLC9A7Q96T83 725 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 FNIP2Q9P278 1114 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 CD300AQ9UGN4 299 aa13.43□□□□□ -0.26
GABPB1-201ENST00000220429 PTPRDP23468 1912 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms