RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 NPAS3Q8IXF0 933 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 TRAM1L1Q8N609 369 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 OR4F6Q8NGB9 312 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 TSPEARQ8WU66 669 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 ASB16Q96NS5 453 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 MCOLN1Q9GZU1 580 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 WWOXQ9NZC7 414 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 NDUFAF1Q9Y375 327 aa29.17■■■□□ 2.26
PABPN1-201ENST00000216727 C16orf96A6NNT2 1141 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 MAP3K7O43318 606 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 NFATC1O95644 943 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 CAPN1P07384 714 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 RALGDSQ12967 914 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 C9orf50Q5SZB4 431 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 HENMT1Q5T8I9 393 aaKnown RBP29.16■■■□□ 2.26
PABPN1-201ENST00000216727 Q6ZVL8 140 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 DHDDSQ86SQ9 333 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 HIPK4Q8NE63 616 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 OR2T11Q8NH01 316 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 SCAMP4Q969E2 229 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 DCUN1D1Q96GG9 259 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 SFXN1Q9H9B4 322 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 SPAG4Q9NPE6 437 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 CFAP99D6REC4 459 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 NUAK1O60285 661 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 XPAP23025 273 aaPredicted RBP29.16■■■□□ 2.26
PABPN1-201ENST00000216727 ERVK-8P63133 956 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 COQ5Q5HYK3 327 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 TTC23LQ6PF05 361 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 DCBLD1Q8N8Z6 715 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 SMARCD2Q92925 531 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 ATP6V1E2Q96A05 226 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 ZSCAN5AQ9BUG6 496 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 BRINP2Q9C0B6 783 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 TMEM45AQ9NWC5 275 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 OPTCQ9UBM4 332 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 CROTQ9UKG9 612 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 PLXNA2O75051 1894 aa29.16■■■□□ 2.26
PABPN1-201ENST00000216727 E7ENX8 843 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 BCAS2O75934 225 aaPredicted RBP29.15■■■□□ 2.26
PABPN1-201ENST00000216727 AP2A2O94973 939 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 ENO2P09104 434 aaPredicted RBP29.15■■■□□ 2.26
PABPN1-201ENST00000216727 AKT1P31749 480 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 DIO3P55073 304 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 HOMEZQ8IX15 550 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 TIFAQ96CG3 184 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 ADA2Q9NZK5 511 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 KPNA5O15131 536 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 MMP12P39900 470 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 ETV3P41162 512 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 CDKL1Q00532 357 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 MS4A2Q01362 244 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 PLEKHS1Q5SXH7 462 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 BLOC1S3Q6QNY0 202 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 RNF111Q6ZNA4 994 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 Q6ZSR9 355 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 MILR1Q7Z6M3 343 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 DDHD1Q8NEL9 900 aa29.15■■■□□ 2.26
PABPN1-201ENST00000216727 SUCOQ9UBS9 1254 aaKnown RBP29.15■■■□□ 2.26
PABPN1-201ENST00000216727 MBD1Q9UIS9 605 aaPredicted RBP29.15■■■□□ 2.26
PABPN1-201ENST00000216727 H3BNX3 289 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 K7EPI3 171 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 NR5A2O00482 541 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 ACOT8O14734 319 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 MPC1LP0DKB6 136 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 NRIP1P48552 1158 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 NME5P56597 212 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 C6orf136Q5SQH8 315 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 TECPR1Q7Z6L1 1165 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 RETREG3Q86VR2 466 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 ASB9Q96DX5 294 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 SUN2Q9UH99 717 aa29.14■■■□□ 2.26
PABPN1-201ENST00000216727 C8GP07360 202 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ANXA5P08758 320 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ARL1P40616 181 aaPredicted RBP29.13■■■□□ 2.25
PABPN1-201ENST00000216727 KCNC3Q14003 757 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 PDCD4Q53EL6 469 aaKnown RBP29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ERAP2Q6P179 960 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 SCIMPQ6UWF3 145 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 RNF165Q6ZSG1 346 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 RNF148Q8N7C7 305 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 SLC12A9Q9BXP2 914 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 EBF3Q9H4W6 596 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 SLC52A3Q9NQ40 469 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 TMEM181Q9P2C4 612 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ANGPTL3Q9Y5C1 460 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 MSH3P20585 1137 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 CAPN3P20807 821 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 PIK3CGP48736 1102 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 RPIAP49247 311 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 GAB4Q2WGN9 574 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ATP6AP1LQ52LC2 224 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 DET1Q7L5Y6 550 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 ZNF366Q8N895 744 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 GDPD5Q8WTR4 605 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 FGF13Q92913 245 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 NTMT1Q9BV86 223 aa29.13■■■□□ 2.25
PABPN1-201ENST00000216727 RIOK2Q9BVS4 552 aaKnown RBP29.13■■■□□ 2.25
PABPN1-201ENST00000216727 LAMA3Q16787 3333 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 PRRT4C9JH25 899 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms