RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SLC6A6P31641 620 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SMSP52788 366 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 DCDC5Q6ZRR9 648 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF572Q7Z3I7 529 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NEK7Q8TDX7 302 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MAFIPQ8WZ33 124 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CCDC115Q96NT0 180 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TDRD3Q9H7E2 651 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CRTAC1Q9NQ79 661 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 STARD7Q9NQZ5 370 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TREHO43280 583 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 LRRTM2O43300 516 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF806P0C7X5 589 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ADH6P28332 368 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CRISP1P54107 249 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PPATQ06203 517 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TBX2Q13207 712 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SNAPC1Q16533 368 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GCNT6Q5T4J0 391 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CYP2U1Q7Z449 544 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MAB21L3Q8N8X9 362 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PYDC1Q8WXC3 89 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TCEAL3Q969E4 200 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SH2D3AQ9BRG2 576 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 LRRC4CQ9HCJ2 640 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NLGN3Q9NZ94 848 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZDHHC9Q9Y397 364 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PCDHB9Q9Y5E1 797 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM14AQ9Y6G1 99 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 FER1L5A0AVI2 2057 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 DOCK8Q8NF50 2099 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SH3PXD2BA1X283 911 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 H0YGN5 161 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TFECO14948 347 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CYB5BO43169 146 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NADKO95544 446 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PBX3P40426 434 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GRK6P43250 576 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CPA2P48052 419 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GTF2BQ00403 316 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RAB41Q5JT25 222 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CAND1Q86VP6 1230 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MMAAQ8IVH4 418 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 C17orf62Q9BQA9 187 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MRPL17Q9NRX2 175 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GRM6O15303 877 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PAPSS1O43252 624 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 LIASO43766 372 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OR1I1O60431 355 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 RASGRP1O95267 797 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 LYPLA2O95372 231 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C22orf31O95567 290 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SELENOVP59797 346 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 UNC5DQ6UXZ4 953 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 RBM44Q6ZP01 1051 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 APTXQ7Z2E3 356 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 ATG9AQ7Z3C6 839 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MMP27Q9H306 513 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 HIPK3Q9H422 1215 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 KAT8Q9H7Z6 458 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 PTTG3PQ9NZH4 202 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CDC14AQ9UNH5 594 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SLC12A8A0AV02 714 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SYN3O14994 580 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NDUFS2O75306 463 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 LINGO3P0C6S8 592 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 USP17L7P0C7H9 530 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TSPAN8P19075 237 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CACNB3P54284 484 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TAS2R31P59538 309 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MRPL49Q13405 166 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 ABRAXAS2Q15018 415 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TAF5Q15542 800 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 COLEC12Q5KU26 742 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF571Q7Z3V5 609 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 MCEMP1Q8IX19 187 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OR5T3Q8NGG3 340 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ADAMTS15Q8TE58 950 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MIPEPQ99797 713 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CIPCQ9C0C6 399 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CD93Q9NPY3 652 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PRDM5Q9NQX1 630 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 TSR3Q9UJK0 312 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 VWA7Q9Y334 891 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 UNCXA6NJT0 531 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PI15O43692 258 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CD72P21854 359 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MIPP30301 263 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SLC15A1P46059 708 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OR3A3P47888 321 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OR3A2P47893 321 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 HCAR3P49019 387 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SLC12A3P55017 1021 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NFKB2Q00653 900 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 METTL2BQ6P1Q9 378 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 FRRS1Q6ZNA5 592 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TMCO2Q7Z6W1 182 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 GPAT4Q86UL3 456 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MIB1Q86YT6 1006 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 DSELQ8IZU8 1212 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms