RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 GTF2IRD2Q86UP8 949 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 SIDT2Q8NBJ9 832 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 OR4K2Q8NGD2 314 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 METTL6Q8TCB7 284 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 BRSK1Q8TDC3 778 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 RPRD1AQ96P16 312 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 POLR1EQ9GZS1 481 aaKnown RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 POLR3HQ9Y535 204 aaPredicted RBP10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 U3KQV3 271 aa10.38□□□□□ -0.75
CX3CL1-201ENST00000006053 LCHNA4D1U4 455 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 KRBA1A5PL33 1030 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CLDN25C9JDP6 229 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 DFNA5O60443 496 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CNOT3O75175 753 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 NIPSNAP2O75323 286 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 TULP3O75386 442 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 MLYCDO95822 493 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 FGF1P05230 155 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 ITGB1P05556 798 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 HOXB8P17481 243 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 GPR15P49685 360 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CD47Q08722 323 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 KCNAB2Q13303 367 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 DDR2Q16832 855 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CTU2Q2VPK5 515 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 SETMARQ53H47 684 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 XKR7Q5GH72 579 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 DLEU7Q6UYE1 221 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 Q6ZSR9 355 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 EFL1Q7Z2Z2 1120 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 BPHLQ86WA6 291 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 THEM5Q8N1Q8 247 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CHDHQ8NE62 594 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 OR10A6Q8NH74 314 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 GPR152Q8TDT2 470 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 SH3YL1Q96HL8 342 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 NUSAP1Q9BXS6 441 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 AMBRA1Q9C0C7 1298 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 ADGRE2Q9UHX3 823 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 MED16Q9Y2X0 877 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CAPN1P07384 714 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 HTR1AP08908 422 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 HLA-DPA1P20036 260 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 HUNKP57058 714 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 GRIK2Q13002 908 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 IRF5Q13568 498 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CRY1Q16526 586 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 C18orf21Q32NC0 220 aaPredicted RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 FBXL22Q6P050 247 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 SLCO6A1Q86UG4 719 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 GPSM1Q86YR5 675 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 OR2T12Q8NG77 320 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 NCLNQ969V3 563 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 FAM162AQ96A26 154 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 EXOC2Q96KP1 924 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 B3GALT6Q96L58 329 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 EHD1Q9H4M9 534 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 CPQQ9Y646 472 aa10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
CX3CL1-201ENST00000006053 GLTPD2A6NH11 291 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ZBBXA8MT70 800 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 WASH4PA8MWX3 477 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 OR1I1O60431 355 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 CNPP09543 421 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 OR1E1P30953 314 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 RPL9P32969 192 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 GGT5P36269 586 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ERVPABLB-1P60509 514 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 NRG1Q02297 640 aaPredicted RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 NKG7Q16617 165 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 SLC39A12Q504Y0 691 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 CYP20A1Q6UW02 462 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 RBM23Q86U06 439 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 GPR150Q8NGU9 434 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 EEF1AKMT1Q8WVE0 214 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ISG20Q96AZ6 181 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 LINGO1Q96FE5 620 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ITCHQ96J02 903 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ZNF347Q96SE7 839 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 UGT2B28Q9BY64 529 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 POPDC3Q9HBV1 291 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 PRDM5Q9NQX1 630 aaPredicted RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 TRMT6Q9UJA5 497 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 FAM47E-STBD1D6RA91 191 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 AXIN1O15169 862 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 PABPC1P11940 636 aaKnown RBP10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 GGT1P19440 569 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 PIK3CGP48736 1102 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 HK3P52790 923 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 ACVR1Q04771 509 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 TRIM32Q13049 653 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 LETMD1Q6P1Q0 360 aa10.36□□□□□ -0.75
CX3CL1-201ENST00000006053 BEND5Q7L4P6 421 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms