RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Sema3dQ8BH34 777 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Gm3411Q8C7R2 150 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Exd1Q8CDF7 570 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Vmn1r185Q8R299 319 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cyyr1Q8VIH7 165 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cnbd2Q9D5U8 673 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 RtcAQ9D7H3 366 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Krt7Q9DCV7 457 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 PrccQ9EQC8 491 aaKnown RBP16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ak1Q9R0Y5 194 aa16.11■□□□□ 0.17
Trim54-202ENSMUST00000202769 HelzQ6DFV5 1964 aaKnown RBP16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cacna1aP97445 2368 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ccdc163A2AGD7 326 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Nt5c1aA3KFX0 365 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Morc3F7BJB9 942 aaKnown RBP16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Vmn2r12L7N217 831 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Vmn2r112L7N221 857 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 P01673 111 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Slc2a7P0C6A1 513 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Slc2a3P32037 493 aaKnown RBP16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 HmgclP38060 325 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Sstr4P49660 385 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 QrfprP83861 433 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cdk16Q04735 496 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 InscQ3HNM7 579 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ppp1r7Q3UM45 361 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Q3USZ8 430 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Rasgrp3Q6NZH9 691 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Vmn2r26Q6TAC4 855 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Eml2Q7TNG5 649 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Mblac2Q8BL86 279 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 RalylQ8BTF8 293 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 4921511C20RikQ8BVT7 469 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Fgd2Q8BY35 655 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Lrrc19Q8BZT5 364 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 N4bp2l2Q8JZS6 575 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 BroxQ8K2Q7 411 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Sash3Q8K352 380 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Pcdhb21Q91V48 774 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Egln2Q91YE2 419 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Dhx58Q99J87 678 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 BniplQ99JU7 328 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Bud23Q9CY21 281 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Tssk3Q9D2E1 268 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Pi16Q9ET66 489 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 H2afb2S4R1M3 115 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 NbeaQ9EPN1 2936 aa16.1■□□□□ 0.17
Trim54-202ENSMUST00000202769 Myo18aQ9JMH9 2050 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Igkv6-25A0A140T8N7 115 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Egfbp2P36368 261 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 St3gal1P54751 337 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Epha4Q03137 986 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 ptchd1Q14B62 888 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Nol9Q3TZX8 714 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Kdm4dQ3U2K5 510 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ampd1Q3V1D3 745 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Repin1Q5U4E2 545 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ubxn7Q6P5G6 467 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ppp2r1bQ7TNP2 601 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Sass6Q80UK7 654 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Skida1Q80YR3 822 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Pcid2Q8BFV2 399 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Dupd1Q8BK84 215 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Taf15Q8BQ46 557 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Arhgap25Q8BYW1 648 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Zfp62Q8C827 914 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Adam4Q8CGQ2 763 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Pacs1Q8K212 961 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ube2q2Q8K2Z8 378 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Rdh16f2Q8K3M1 318 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Mptx1Q8R1M8 219 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Evi2bQ8VD58 444 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Fam110cQ8VE94 421 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Olfr806Q8VFI2 313 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Tcf7l2Q924A0 459 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cpt1bQ924X2 772 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Lactb2Q99KR3 288 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 St13Q99L47 371 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Chchd2Q9D1L0 153 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Gbe1Q9D6Y9 702 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 C1qtnf2Q9D8U4 294 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Klc4Q9DBS5 619 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 PllpQ9DCU2 182 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Cmtm7Q9ESD6 167 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Tmem9bQ9JJR8 199 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ecel1Q9JMI0 775 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Kifc1Q9QWT9 674 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Mmp17Q9R0S3 578 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 PygmQ9WUB3 842 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Srpk3Q9Z0G2 565 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Ybx2Q9Z2C8 360 aaKnown RBP16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Jmjd1cQ69ZK6 2350 aa16.09■□□□□ 0.17
Trim54-202ENSMUST00000202769 Siah3B2RWG3 268 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Rnf169E9Q7F2 694 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Tsc22d2E9Q7M2 769 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Zfp809G3X9G7 402 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Obox5G3X9P6 291 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Gm20828J3KMI7 228 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Gm11168J3QN50 228 aa16.08■□□□□ 0.16
Trim54-202ENSMUST00000202769 Gpld1O70362 837 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms