RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Zfp189Q8BKP2 608 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Igdcc3Q8BQC3 813 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dennd1cQ8CFK6 786 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Grk5Q8VEB1 590 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrch4Q921G6 680 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cmtm7Q9ESD6 167 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc25a25A2ASZ8 469 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cdc6O89033 562 aaKnown RBP16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cyp2b9P12790 491 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 TtkP35761 856 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Snx31Q6P8Y7 439 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc25a36Q922G0 311 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Orc5Q9WUV0 435 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ninj1O70131 152 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mup4P11590 178 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Vcam1P29533 739 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Msantd2Q6NZR2 559 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr1152Q7TR34 310 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Klhl42Q8BFQ9 493 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Trmt10aQ8C1Z8 328 aaKnown RBP16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ipo13Q8K0C1 963 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Grhl2Q8K5C0 625 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrrc57Q9D1G5 239 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Stxbp1O08599 594 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 B3galt2O54905 422 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 JtbO88824 146 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 MndaP0DOV1 425 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 DckP43346 260 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmem65Q4VAE3 234 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zfp940Q8R2Q3 566 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Apobec3Q99J72 440 aaKnown RBP16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 ApmapQ9D7N9 415 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Grb14Q9JLM9 538 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rab25Q9WTL2 213 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lmtk3Q5XJV6 1424 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam83cA2ARK0 776 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 G430095P16RikE9Q913 147 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CntfP51642 198 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Smpdl3aP70158 445 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 KptnQ8VCX6 430 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pskh1Q91YA2 424 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam124aD3Z5V4 536 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rdh8D3Z6W3 317 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 RptnP97347 1118 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Abl2Q4JIM5 1182 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Spef1Q99JL1 234 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sytl2Q99N50 950 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Vwa7Q9JHA8 891 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Man1b1A2AJ15 658 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cpt2P52825 658 aaKnown RBP16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mrpl10Q3TBW2 262 aaKnown RBP16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc2a6Q3UDF0 497 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 RfflQ6ZQM0 377 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr1355Q7TQU9 310 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc39a13Q8BZH0 361 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Uchl1Q9R0P9 223 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr742A2RTP5 311 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ptpn9O35239 593 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Phlda1Q62392 405 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Usf2Q64705 346 aaKnown RBP16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 McmbpQ8R3C0 642 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sh3d19Q91X43 789 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tbc1d21Q9D9D3 336 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Plod2Q9R0B9 737 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc7a5Q9Z127 512 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tceal7A3KGA4 98 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Has3O08650 554 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmc6Q7TN60 810 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmem161bQ8C2L6 487 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 GnalQ8CGK7 381 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Nrif1Q923B3 828 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ankrd61Q9CQM6 421 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Trpv4Q9EPK8 871 aa16.4■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm3259D3YUK0 475 aa16.39■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Magea1O89006 320 aa16.39■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fbxo40P62932 710 aa16.39■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 NtsQ9D3P9 169 aa16.39■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Magea2Q9R2A2 320 aa16.39■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Nrg1Q6DR99 700 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr826Q8VFU6 313 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr825Q8VFU7 320 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ranbp3Q9CT10 491 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sipa1l1Q8C0T5 1782 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rpl7aP12970 266 aaKnown RBP16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 MafP54843 370 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 RhoqQ8R527 205 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Kif13bA0A286YCV9 1847 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm8020F6WLE9 229 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nrp2O35375 931 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Xkr4Q5GH67 647 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm12258Q5NC63 627 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gpr142Q7TQN9 365 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fbxw21Q8BI38 468 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Spata2lQ8BNN1 426 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nedd4lQ8CFI0 1004 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc5a9Q8VDT1 685 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gkn2Q9CQS6 184 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Unc13bQ9Z1N9 1602 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm27029A2A4P4 543 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zc3h12bG3X9I7 835 aa16.39■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms