RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cln3Q61124 438 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CcncQ62447 283 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prap1Q80XD8 149 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rbm11Q80YT9 238 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rbm4Q8C7Q4 361 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ftsj1Q8CBC7 324 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Steap3Q8CI59 488 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 PvrQ8K094 408 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Itgbl1Q8VDV0 494 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ttc39cQ8VE09 580 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rbm4bQ8VE92 357 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ilf2Q9CXY6 390 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hcar2Q9EP66 360 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mrpl46Q9EQI8 283 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dkk3Q9QUN9 349 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Myo5aQ99104 1853 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sult2a7A0A1B0GRF0 313 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kcna10B2RQA1 511 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 FanceB8JJD6 213 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm2888K7N746 267 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Edil3O35474 480 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc22a8O88909 537 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 P01650 108 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 P01653 108 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cyp2c37P56654 490 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hbq1bQ3U0A6 142 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pnpla1Q3V1D5 599 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pla2g4dQ50L43 825 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ephx4Q6IE26 359 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr667Q7TRP4 326 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Treml1Q8K558 317 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Marc2Q922Q1 338 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Serpinb1aQ9D154 379 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Haus5Q9D786 619 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Myo7aP97479 2215 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc43a3A2AVZ9 502 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zscan5bB2RTN3 468 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ccnb1ip1D3Z3K2 276 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm8922F6XVS9 199 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm7535F7CXE4 302 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm20441G3UYJ7 252 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm2244L7N2A3 218 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Atn1O35126 1175 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hcrtr1P58307 416 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fam47cQ14BE7 430 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cyp2c66Q5GLZ0 490 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sdf4Q61112 361 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 A4galtQ67BJ4 359 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gpr171Q8BG55 319 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Msantd1Q8BIL2 278 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc7a4Q8BLQ7 635 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sf3b4Q8QZY9 424 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tnfaip8Q921Z5 198 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Retreg3Q9CQV4 466 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Anks3Q9CZK6 655 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm17615E9Q9P2 165 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sult3a2G5E904 293 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r67K7N6T2 851 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Stmn3O70166 180 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Stx7O70439 261 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Oaz1P54369 227 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Trappc9Q3U0M1 1148 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Senp5Q6NXL6 749 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fastkd5Q7TMV3 762 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 MroQ7TNB4 248 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc25a24Q8BMD8 475 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Grsf1Q8C5Q4 479 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 ManbaQ8K2I4 879 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Usp3Q91W36 520 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adgre4Q91ZE5 689 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 EbplQ9D0P0 206 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Arih2Q9Z1K6 492 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm6592A2AHC7 168 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr1200A2ATJ4 336 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mterf1bB9EJ57 379 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm10717D3Z1I8 228 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r54K7N649 806 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm3696K7N751 203 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rab23P35288 237 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rps3aP97351 264 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hyal4Q05A56 481 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Smim24Q0VG18 120 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Bfsp2Q6NVD9 416 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Reep1Q8BGH4 201 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Smco1Q8CEZ1 214 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 P3h2Q8CG71 703 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hspa12bQ9CZJ2 685 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 1700034I23RikQ9D9Q3 184 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Lcn6A2AJB9 181 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc16a6B1AT66 607 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 ApoeP08226 311 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vipr1P97751 459 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ddx51Q6P9R1 639 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr834Q7TRG8 312 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Lrch3Q8BVU0 778 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rbms3Q8BWL5 431 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dhrs4Q99LB2 279 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 PglsQ9CQ60 257 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gtf2e2Q9D902 292 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tnfrsf21Q9EPU5 655 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms