RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gm10338K7N692 204 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Neurod4O09105 330 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hoxd10P28359 340 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Colec11Q3SXB8 272 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gprin1Q3UNH4 932 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tp53i13Q5F267 385 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Crls1Q80ZM8 303 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sphk1Q8CI15 382 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Celf3Q8CIN6 465 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr808Q8VGI8 312 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 TympQ99N42 471 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pmf1Q9CPV5 202 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Srfbp1Q9CZ91 441 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dnase1l1Q9D7J6 314 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Chrac1Q9JKP8 129 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r15L7N2A0 855 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 ClppO88696 272 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 RapsnP12672 412 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Anxa4P97429 319 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 PepdQ11136 493 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Abcb7Q61102 752 aaKnown RBP10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vps72Q62481 368 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Il31raQ8K5B1 716 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kctd5Q8VC57 234 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp617Q91WM0 559 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cd209eQ91ZW7 208 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dhrs7bQ99J47 323 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ttc25Q9D4B2 624 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Clic3Q9D7P7 237 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Abca14E9Q8F8 1683 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slit3Q9WVB4 1523 aa10.03□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm21885A0A286YDN8 145 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r11E9Q4X4 861 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 NagluO88325 739 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tulp2P46686 562 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lats2Q7TSJ6 1042 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cept1Q8BGS7 416 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kctd7Q8BJK1 289 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Castor2Q8CAB8 329 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 NaprtQ8CC86 538 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 KptnQ8VCX6 430 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmp1Q99KU0 406 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 4931417E11RikQ9CR05 305 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rpl4Q9D8E6 419 aaKnown RBP10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Upk1bQ9Z2C6 260 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8127E9Q0P0 100 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kcnq1P97414 668 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bop1P97452 732 aaKnown RBP10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zdhhc20Q5Y5T1 380 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 GapdhsQ64467 440 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfml2aQ8BHP7 681 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Prox2Q8BII1 593 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tas1r2Q925I4 843 aa10.02□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sh3pxd2bA2AAY5 908 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tyw5A2RSX7 315 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm8050L7N2E3 205 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Hes2O54792 157 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gal3st3P61315 431 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm7030Q0WXH6 285 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Acsm3Q3UNX5 580 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Naa11Q3UX61 218 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 CcnhQ61458 323 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Jak2Q62120 1129 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tspan18Q80WR1 248 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rassf1Q99MK9 340 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gkn2Q9CQS6 184 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Atp6ap2Q9CYN9 350 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zdhhc21Q9D270 265 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 2010005H15RikQ9D8D6 97 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Eif3kQ9DBZ5 218 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cngb3Q9JJZ9 694 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 DgkeQ9R1C6 564 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cdh22Q9WTP5 813 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Itgb6Q9Z0T9 787 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fam83cA2ARK0 776 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Catsperg2C6KI89 1145 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Adamts14E9PX39 1209 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm5407E9Q7Q1 248 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 DdcO88533 480 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Csf2P01587 141 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PfklP12382 780 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Hsd11b2P51661 386 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fmo3P97501 534 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Macrod2Q3UYG8 475 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Znf366Q6NS86 746 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tdrd12Q9CWU0 1215 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc25a19Q9DAM5 318 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slco1a4Q9EP96 670 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rai2Q9QVY8 529 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rnf157Q3TEL6 685 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rnft2Q3UF64 445 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cyp4f37Q3V1F1 546 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Phf12Q5SPL2 1003 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp90Q61967 636 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc9a7Q8BLV3 726 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ago3Q8CJF9 860 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fbxo33Q8VE08 562 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pth2rQ91V95 546 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Lpin1Q91ZP3 924 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ndfip2Q91ZP6 311 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms