RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ZNF542PQ5EBM4 170 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 CEP85LQ5SZL2 805 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 METRNLQ641Q3 311 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 CFAP206Q8IYR0 622 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 FSTL5Q8N475 847 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ACVR1CQ8NER5 493 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 HM13Q8TCT9 377 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 LKAAEAR1Q8TD35 194 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ASZ1Q8WWH4 475 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ELMO1Q92556 727 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ISL2Q96A47 359 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-213ENST00000642137 GPR21Q99679 349 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 OLFM1Q99784 485 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 GSDMCQ9BYG8 508 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 TCEAL2Q9H3H9 227 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-213ENST00000642137 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 KLC4Q9NSK0 619 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 GULP1Q9UBP9 304 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 TBK1Q9UHD2 729 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 LGALS13Q9UHV8 139 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 ACSL5Q9ULC5 683 aa12.1□□□□□ -0.47
LINC00339-213ENST00000642137 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 A0A1B0GTQ1 180 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PRR19A6NJB7 356 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 SMIM23A6NLE4 172 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 TRIM49D1C9J1S8 452 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PROB1E7EW31 1015 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 EIF3FO00303 357 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 YKT6O15498 198 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ATP8B1O43520 1251 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 LRP3O75074 770 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 APOA4P06727 396 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ACP5P13686 325 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 SAT1P21673 171 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 IDSP22304 550 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CRABP2P29373 138 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 TYK2P29597 1187 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ARRB1P49407 418 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CSRP3P50461 194 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 RAB10P61026 200 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ILF3Q12906 894 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 GRIK2Q13002 908 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 RPA4Q13156 261 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 BMPR2Q13873 1038 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 GBX1Q14549 363 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ELOCQ15369 112 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 KRT71Q3SY84 523 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PAQR3Q6TCH7 311 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CEP97Q8IW35 865 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CYP4X1Q8N118 509 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ZBTB2Q8N680 514 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CD200R1Q8TD46 325 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 MZB1Q8WU39 189 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 DPEP2Q9H4A9 486 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 COG4Q9H9E3 785 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CTNNAL1Q9UBT7 734 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 APOBEC3BQ9UH17 382 aaKnown RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 TRMT6Q9UJA5 497 aaKnown RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 HCN4Q9Y3Q4 1203 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 PLEKHM1Q9Y4G2 1056 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CSNK1G3Q9Y6M4 447 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ADAMTS9Q9P2N4 1935 aa12.09□□□□□ -0.47
LINC00339-213ENST00000642137 ZFC3H1O60293 1989 aaKnown RBP12.09□□□□□ -0.47
LINC00339-213ENST00000642137 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 AGPSO00116 658 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PIAS2O75928 621 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SLCO2B1O94956 709 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 WISP3O95389 354 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CER1O95813 267 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 MT-ND3P03897 115 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 MPOP05164 745 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 C2P06681 752 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CBSLP0DN79 551 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 DGKAP23743 735 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PBLDP30039 288 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CBSP35520 551 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SLC26A3P40879 764 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 MAGEA12P43365 314 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SERPINB8P50452 374 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 BNIP3Q12983 259 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 NFE2L1Q14494 772 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 TMED2Q15363 201 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SHBQ15464 509 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms