RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PSMD7P51665 324 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 NFATC3Q12968 1075 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ABRAXAS2Q15018 415 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 NAT16Q8N8M0 369 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ITFG1Q8TB96 612 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 SNX19Q92543 992 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF382Q96SR6 550 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CSF3RQ99062 836 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CINPQ9BW66 212 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 TDRD1Q9BXT4 1180 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 SMURF2Q9HAU4 748 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 SEPT3Q9UH03 358 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 OR7A17O14581 309 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 LSM1O15116 133 aaKnown RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 DFNA5O60443 496 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 TLR5O60602 858 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 VNN2O95498 520 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 ASGR1P07306 291 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 IL7RP16871 459 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 NFKBIAP25963 317 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 BMXP51813 675 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 TRAF2Q12933 501 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 LAPTM5Q13571 262 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 DAG1Q14118 895 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF829Q3KNS6 432 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 ENPP6Q6UWR7 440 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 EFL1Q7Z2Z2 1120 aaKnown RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 CLEC4FQ8N1N0 589 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 OR4F6Q8NGB9 312 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 SEPT5Q99719 369 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 YTHDF1Q9BYJ9 559 aaKnown RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 IKZF5Q9H5V7 419 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 HEBP1Q9NRV9 189 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 MAGEL2Q9UJ55 1249 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 F5H5T6 163 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 H3BNC9 293 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 PRAMEF12O95522 483 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 LPOP22079 712 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 GGT5P36269 586 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 MTHFRP42898 656 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 SGSHP51688 502 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 MLLT10P55197 1068 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 PIGFQ07326 219 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 TRIM32Q13049 653 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 CBX2Q14781 532 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 PTGR1Q14914 329 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 AP5B1Q2VPB7 878 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 GLB1LQ6UWU2 654 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 C17orf99Q6UX52 265 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 LHPPQ9H008 270 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 SPATA7Q9P0W8 599 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 UBA2Q9UBT2 640 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 ZMYM5Q9UJ78 669 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 POLR3HQ9Y535 204 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-233ENST00000642021 CORINQ9Y5Q5 1042 aa13.63□□□□□ -0.23
PHGDH-233ENST00000642021 J3QRK9 145 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 NOBOXO60393 691 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 KCNH1O95259 989 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 NPPAP01160 153 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 F11P03951 625 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 ANXA6P08133 673 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 RAP2AP10114 183 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 THRBP10828 461 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 GGT1P19440 569 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 PIK3CGP48736 1102 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 KIAA0040Q15053 153 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 NR6A1Q15406 480 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
PHGDH-233ENST00000642021 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 FIG4Q92562 907 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 FBXL8Q96CD0 374 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 PLEKHA8Q96JA3 519 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 GLT1D1Q96MS3 346 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 GPR62Q9BZJ7 368 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 ADNPQ9H2P0 1102 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 TOR3AQ9H497 397 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 OLA1Q9NTK5 396 aaKnown RBP13.62□□□□□ -0.23
PHGDH-233ENST00000642021 PCDHGA8Q9Y5G5 932 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 BOLA2-SMG1P6H3BVE0 249 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 ARNTLO00327 626 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 DEAF1O75398 565 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-233ENST00000642021 SEC14L2O76054 403 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 ZBTB11O95625 1053 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-233ENST00000642021 PSMA3P25788 255 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 PIGAP37287 484 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 MAGEA11P43364 429 aa13.62□□□□□ -0.23
PHGDH-233ENST00000642021 CLCN7P51798 805 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms