RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 VCANP13611 3396 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 SYCE1LA8MT33 242 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 SUPT7LO94864 414 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 PCCBP05166 539 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 NDUFV2P19404 249 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 SERPINB3P29508 390 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 EEF1DP29692 281 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 CDH13P55290 713 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 HSPA14Q0VDF9 509 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 TTLL9Q3SXZ7 439 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ZNF658BQ4V348 819 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 PRPF38BQ5VTL8 546 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 XKR5Q6UX68 686 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 MTDHQ86UE4 582 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ZNF687Q8N1G0 1237 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 GANCQ8TET4 914 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ESAMQ96AP7 390 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 MRGPRX1Q96LB2 322 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 A0A1B0GTL3 188 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 CCDC189A1A4V9 331 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 PRR23AA6NEV1 266 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 GRID2O43424 1007 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 RPS17P08708 135 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 CBSLP0DN79 551 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 CBSP35520 551 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 SERPINB5P36952 375 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 IDH3AP50213 366 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 RPL14P50914 215 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM259Q4ZIN3 620 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 PNCKQ6P2M8 343 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM220Q6QAJ8 160 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 YTHDF3Q7Z739 585 aaKnown RBP17.28■□□□□ 0.36
PHGDH-232ENST00000641947 OR14C36Q8NHC7 312 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ELMO1Q92556 727 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ERP27Q96DN0 273 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 COX14Q96I36 57 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 NUDT4Q9NZJ9 180 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 FAM8A1Q9UBU6 413 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 MMP17Q9ULZ9 603 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 DUSP12Q9UNI6 340 aa17.28■□□□□ 0.36
PHGDH-232ENST00000641947 MATN2O00339 956 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 NUAK1O60285 661 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 GPC4O75487 556 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 SETDB1Q15047 1291 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 AGERQ15109 404 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 IRF4Q15306 451 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 MLF2Q15773 248 aaPredicted RBP17.27■□□□□ 0.35
PHGDH-232ENST00000641947 GALNTL6Q49A17 601 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 SLC9B1Q4ZJI4 515 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 SH2D4BQ5SQS7 431 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 ADAMTSL4Q6UY14 1074 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 MBOAT1Q6ZNC8 495 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 CUZD1Q86UP6 607 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 HEATR4Q86WZ0 1026 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 ZNF547Q8IVP9 402 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 TP53I13Q8NBR0 393 aaPredicted RBP17.27■□□□□ 0.35
PHGDH-232ENST00000641947 SIPA1Q96FS4 1042 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 MSANTD3Q96H12 275 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 LGR4Q9BXB1 951 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 KDM4CQ9H3R0 1056 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 C2orf42Q9NWW7 574 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 CD274Q9NZQ7 290 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 CA14Q9ULX7 337 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 OARD1Q9Y530 152 aa17.27■□□□□ 0.35
PHGDH-232ENST00000641947 A0A1W2PQU0 124 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 STX16-NPEPL1H3BU86 382 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 STX16O14662 325 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 RAD51BO15315 384 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FFAR2O15552 330 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FTH1P02794 183 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 ZNF8P17098 575 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-232ENST00000641947 ALDH18A1P54886 795 aaKnown RBP17.26■□□□□ 0.35
PHGDH-232ENST00000641947 PPP2CBP62714 309 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 PPP2CAP67775 309 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 CRY1Q16526 586 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 EPGNQ6UW88 154 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 CCDC121Q6ZUS5 278 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FRA10AC1Q70Z53 315 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 PDPRQ8NCN5 879 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 SIKE1Q9BRV8 207 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 C1QTNF3Q9BXJ4 246 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-232ENST00000641947 ZBTB26Q9HCK0 441 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 TRIM39Q9HCM9 518 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 DNAJC28Q9NX36 388 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 EIF2B4Q9UI10 523 aaKnown RBP17.26■□□□□ 0.35
PHGDH-232ENST00000641947 PCTPQ9UKL6 214 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 TMEM98Q9Y2Y6 226 aa17.26■□□□□ 0.35
PHGDH-232ENST00000641947 TCRBV21S2A2A0A5A6 115 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms