RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SH3BP2P78314 561 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 IFI35P80217 286 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 BASP1P80723 227 aaKnown RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 FOXM1Q08050 763 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ITKQ08881 620 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ZBTB17Q13105 803 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PEX6Q13608 980 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 SEPT6Q14141 434 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 P3H1Q32P28 736 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 FAM182AQ5T1J6 154 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 MARC1Q5VT66 337 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ITPRIPL1Q6GPH6 555 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 IYDQ6PHW0 289 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ESX1Q8N693 406 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 TEX19Q8NA77 164 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 GLIS1Q8NBF1 620 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 LRRC45Q96CN5 670 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ELMO2Q96JJ3 720 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 SPATA13Q96N96 652 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 AGAP3Q96P47 875 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 EFHD1Q9BUP0 239 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 ULBP3Q9BZM4 244 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 SARS2Q9NP81 518 aaKnown RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 HAUS2Q9NVX0 235 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 RBM22Q9NW64 420 aaKnown RBP eCLIP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 OGFRQ9NZT2 677 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PAK5Q9P286 719 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PLEKHB1Q9UF11 243 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 RSPH14Q9UHP6 348 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 TRHDEQ9UKU6 1024 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 CNOT6Q9ULM6 557 aaKnown RBP9.87□□□□□ -0.83
PHGDH-222ENST00000641587 PPIL1Q9Y3C6 166 aa9.87□□□□□ -0.83
PHGDH-222ENST00000641587 MN1Q10571 1320 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 A0A0J9YYE9 177 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 C5orf60A6NFR6 353 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 FADS2P1A8MWK0 482 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 MKRN2OSH3BPM6 223 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 KATNA1O75449 491 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 CLDN7O95471 211 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 TRBC1P01850 177 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 TYRP1P17643 537 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 HSPA9P38646 679 aaKnown RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 LMAN1P49257 510 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 SEPHS1P49903 392 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 STC1P52823 247 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 MC1RQ01726 317 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 DSC2Q02487 901 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 WASHC5Q12768 1159 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 CALCOCO2Q13137 446 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 LRP8Q14114 963 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 NAA30Q147X3 362 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ANKRD20A2Q5SQ80 823 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ZNF648Q5T619 568 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ANKRD20A1Q5TYW2 823 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ANKRD20A3Q5VUR7 823 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 IZUMO3Q5VZ72 239 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ASB18Q6ZVZ8 466 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ATCAYQ86WG3 371 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 IFT20Q8IY31 132 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ZNF567Q8N184 647 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 IFT81Q8WYA0 676 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 MAML1Q92585 1016 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 SNF8Q96H20 258 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 TGM7Q96PF1 710 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 RUFY1Q96T51 708 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 VAT1Q99536 393 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ERP44Q9BS26 406 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 ZPBPQ9BS86 351 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 TRIM55Q9BYV6 548 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 PRDM8Q9NQV8 689 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 RAB6BQ9NRW1 208 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 SCHIP1Q9P0W5 487 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 CPNE7Q9UBL6 633 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
PHGDH-222ENST00000641587 TLK1Q9UKI8 766 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 CHKBQ9Y259 395 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 SNX24Q9Y343 169 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 SHANK1Q9Y566 2161 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 KCTD3Q9Y597 815 aa9.86□□□□□ -0.83
PHGDH-222ENST00000641587 CACNA1DQ01668 2161 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 UQCRHLA0A096LP55 91 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 A1L4Q6 167 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 CDC14CA4D256 554 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 E7EVH7 732 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 AGFG2O95081 481 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 TIAF1O95411 115 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 HLA-DQB2P05538 268 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 UQCRHP07919 91 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 F3P13726 295 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 NFKB1P19838 968 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 NFKBIAP25963 317 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 PSMB4P28070 264 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 FDFT1P37268 417 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 RPL21P46778 160 aaKnown RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 LEPRP48357 1165 aaKnown RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 EPHA4P54764 986 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 UBE2IP63279 158 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms